RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CCDC137Q6PK04 289 aaKnown RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 SUSD1Q6UWL2 747 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 OR4N4Q8N0Y3 316 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 CISD2Q8N5K1 135 aaKnown RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 GABPB2Q8TAK5 448 aaPredicted RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 STT3BQ8TCJ2 826 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 GRK7Q8WTQ7 553 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 RERGQ96A58 199 aaPredicted RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 PKP4Q99569 1192 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 EBNA1BP2Q99848 306 aaKnown RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 AGPAT4Q9NRZ5 378 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 TAC3Q9UHF0 121 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 PCDHGA10Q9Y5H3 936 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 COPG1Q9Y678 874 aaKnown RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 GOLGA6L10A0A0M3HER8 536 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 H0YGG7 62 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 MASP2O00187 686 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 EIF3FO00303 357 aaPredicted RBP14.06□□□□□ -0.16
CBX3-203ENST00000409747 PCDH17O14917 1159 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 NRP2O60462 931 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 SLC16A8O95907 504 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 HPP00738 406 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 MPC1LP0DKB6 136 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 COILP38432 576 aaPredicted RBP14.06□□□□□ -0.16
CBX3-203ENST00000409747 ARF3P61204 181 aaPredicted RBP14.06□□□□□ -0.16
CBX3-203ENST00000409747 PRDX1Q06830 199 aaKnown RBP14.06□□□□□ -0.16
CBX3-203ENST00000409747 KLC1Q07866 573 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 ELOAQ14241 798 aaKnown RBP14.06□□□□□ -0.16
CBX3-203ENST00000409747 ESPL1Q14674 2120 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 NR6A1Q15406 480 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 PRTGQ2VWP7 1150 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 GARNL3Q5VVW2 1013 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 ICE2Q659A1 982 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 IGFL2Q6UWQ7 119 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 PAQR7Q86WK9 346 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 TMEM151BQ8IW70 566 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 CSNK1A1LQ8N752 337 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 OR11G2Q8NGC1 345 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 PRR7Q8TB68 274 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 C19orf60Q96EN9 201 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 C10orf90Q96M02 699 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 FBXO6Q9NRD1 293 aaPredicted RBP14.06□□□□□ -0.16
CBX3-203ENST00000409747 C20orf96Q9NUD7 363 aaPredicted RBP14.06□□□□□ -0.16
CBX3-203ENST00000409747 C14orf105Q9NVL8 296 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 ASF1BQ9NVP2 202 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 GALPQ9UBC7 116 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 MAD1L1Q9Y6D9 718 aa14.06□□□□□ -0.16
CBX3-203ENST00000409747 SPTAN1Q13813 2472 aaKnown RBP14.05□□□□□ -0.16
CBX3-203ENST00000409747 IGLV3-12A0A075B6K2 115 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 ZCWPW2A0A1B0GU75 182 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 GOLGA8MH3BSY2 632 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 ZBTB14O43829 449 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 SYF2O95926 243 aaKnown RBP14.05□□□□□ -0.16
CBX3-203ENST00000409747 MAGEA3P43357 314 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 GLRBP48167 497 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 CTBP1Q13363 440 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 DSG2Q14126 1118 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 EIF2S3LQ2VIR3 472 aaKnown RBP14.05□□□□□ -0.16
CBX3-203ENST00000409747 LRRC8EQ6NSJ5 796 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 FBXO42Q6P3S6 717 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 DENND6AQ8IWF6 608 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 ZNF480Q8WV37 535 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 INPP5DQ92835 1189 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 TRIM56Q9BRZ2 755 aaKnown RBP14.05□□□□□ -0.16
CBX3-203ENST00000409747 FAM167BQ9BTA0 163 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 ZBTB20Q9HC78 741 aaPredicted RBP14.05□□□□□ -0.16
CBX3-203ENST00000409747 PLEKHB1Q9UF11 243 aaPredicted RBP14.05□□□□□ -0.16
CBX3-203ENST00000409747 C3orf18Q9UK00 162 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 DHRS7Q9Y394 339 aa14.05□□□□□ -0.16
CBX3-203ENST00000409747 SMAPO00193 183 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 KIF5CO60282 957 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 SEMA7AO75326 666 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 ALOX12BO75342 701 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 MED26O95402 600 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 ANXA5P08758 320 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 FDXRP22570 491 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 SLC1A2P43004 574 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 FNTAP49354 379 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 CUL1Q13616 776 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 PTK6Q13882 451 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 KCTD19Q17RG1 926 aaPredicted RBP14.04□□□□□ -0.16
CBX3-203ENST00000409747 B3GNTL1Q67FW5 361 aaPredicted RBP14.04□□□□□ -0.16
CBX3-203ENST00000409747 ZNF425Q6IV72 752 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 CUZD1Q86UP6 607 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 PARP9Q8IXQ6 854 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 GIMAP7Q8NHV1 300 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 ASB11Q8WXH4 323 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 THOC3Q96J01 351 aaKnown RBP14.04□□□□□ -0.16
CBX3-203ENST00000409747 MS4A14Q96JA4 679 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 TRPC4Q9UBN4 977 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 NOVA2Q9UNW9 492 aaKnown RBP14.04□□□□□ -0.16
CBX3-203ENST00000409747 RUVBL1Q9Y265 456 aaKnown RBP14.04□□□□□ -0.16
CBX3-203ENST00000409747 IGKV1-8A0A0C4DH67 115 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 ANKUB1A6NFN9 424 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 E7ENX8 843 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 GFYI3L273 518 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 CBX6O95503 412 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 HRH2P25021 359 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 CXCR2P25025 360 aa14.04□□□□□ -0.16
CBX3-203ENST00000409747 SKIV2L2P42285 1042 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms