RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CDKL4Q5MAI5 379 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 LGSNQ5TDP6 509 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 TLDC1Q6P9B6 456 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 LCTLQ6UWM7 567 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 RNF44Q7L0R7 432 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ISCA2Q86U28 154 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 PAQR7Q86WK9 346 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 CENPLQ8N0S6 344 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 SLC38A9Q8NBW4 561 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 STAG3L4Q8TBR4 150 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ALKBH8Q96BT7 664 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 PYCR2Q96C36 320 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 LRFN5Q96NI6 719 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 EGFL8Q99944 293 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 CCDC77Q9BR77 488 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 HAUS8Q9BT25 410 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ACTR5Q9H9F9 607 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ENAMQ9NRM1 1142 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 PADI1Q9ULC6 663 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 V9GYY5 206 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ITPR1Q14643 2758 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 CCDC189A1A4V9 331 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ZSCAN9O15535 394 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ZNF749O43361 778 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 SRPX2O60687 465 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 CTSBP07858 339 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 SNRPAP09012 282 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 CCNYL3P0C7X3 344 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 TFEBP19484 476 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 STAT5AP42229 794 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 MAGEA12P43365 314 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ERCC6LQ2NKX8 1250 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 MANEAQ5SRI9 462 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 FBXO42Q6P3S6 717 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ADGRD1Q6QNK2 874 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 VASH2Q86V25 355 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 C17orf64Q86WR6 236 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 CNPY4Q8N129 248 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 RHBDF1Q96CC6 855 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ZNF285Q96NJ3 590 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ZFYVE21Q9BQ24 234 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 SELENOSQ9BQE4 189 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ALG9Q9H6U8 611 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 TMEM184CQ9NVA4 438 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 CUEDC1Q9NWM3 386 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 RNF112Q9ULX5 631 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 TRIM49D1C9J1S8 452 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 H7BY64 318 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 HBQ1P09105 142 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 EZRP15311 586 aaKnown RBP19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 KCNC1P48547 511 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 IRF9Q00978 393 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 PTCHD3Q3KNS1 767 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 TCTE1Q5JU00 501 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 KCTD4Q8WVF5 259 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 UBLCP1Q8WVY7 318 aaPredicted RBP19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 NXNL1Q96CM4 212 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 PRAP1Q96NZ9 151 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 OR4K3Q96R72 315 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 LHX9Q9NQ69 397 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 IRAK4Q9NWZ3 460 aa19.02■□□□□ 0.63
PDLIM2-207ENST00000409417 HEATR5BQ9P2D3 2071 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 A0A0J9YVX5 310 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 NCF1BA6NI72 391 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 NCF1CA8MVU1 366 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 KLHL2O95198 593 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 NCF1P14598 390 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 RORAP35398 523 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 TMPRSS3P57727 454 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 GPS2Q13227 327 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 ZNF517Q6ZMY9 492 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 ADCK2Q7Z695 626 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 TCAIMQ8N3R3 496 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 ZNF655Q8N720 491 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 ABHD11Q8NFV4 315 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 KIAA1143Q96AT1 154 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 MTBPQ96DY7 904 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 CLIP3Q96DZ5 547 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 VPS11Q9H270 941 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 SRPK3Q9UPE1 567 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 SH2B3Q9UQQ2 575 aa19.01■□□□□ 0.63
PDLIM2-207ENST00000409417 LOC105369274A0A096LPK9 316 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 LOC102723532A0A0G2JNH3 316 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 LOC101059948A0A1B0GTJ6 334 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 MEN1O00255 615 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 EFSO43281 561 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 KERAO60938 352 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 KLK3P07288 261 aaPredicted RBP19■□□□□ 0.63
PDLIM2-207ENST00000409417 VSX2P58304 361 aaPredicted RBP19■□□□□ 0.63
PDLIM2-207ENST00000409417 SRSF6Q13247 344 aaKnown RBP19■□□□□ 0.63
PDLIM2-207ENST00000409417 ACAP2Q15057 778 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 WASHC2DQ5SRD0 308 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 SULT1C3Q6IMI6 304 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 FRMPD2BQ6IN97 320 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 RHBDD2Q6NTF9 364 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 KLC3Q6P597 504 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 EMBQ6PCB8 327 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 C19orf48Q6RUI8 117 aa19■□□□□ 0.63
PDLIM2-207ENST00000409417 CCDC81Q6ZN84 652 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms