RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 PLAGL1Q9UM63 463 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 HYAL2Q12891 473 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 LMAN2Q12907 356 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 CTPS2Q9NRF8 586 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 TVP23BQ9NYZ1 205 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 LOC110117498-PIK3R3F6TDL0 507 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 TRIM3O75382 744 aaPredicted RBP24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 NIPAL1Q6NVV3 410 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 C7orf43Q8WVR3 580 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 PSKH2Q96QS6 385 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 OR2M4Q96R27 311 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 PCDHGA12O60330 932 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 GRIA2P42262 883 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 IL18Q14116 193 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 OLFML2AQ68BL7 652 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 MANBAO00462 879 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 TSPAN6O43657 245 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 RLN1P04808 185 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 KCNC3Q14003 757 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 C14orf80Q86SX3 495 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 FAR1Q8WVX9 515 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 PUM1Q14671 1186 aaKnown RBP eCLIP24.4■■□□□ 1.51e-6■■■□□ 15.3
SPIRE1-202ENST00000409402 FITM2Q8N6M3 262 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 DNAJB9Q9UBS3 223 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 BACE2Q9Y5Z0 518 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 SLCO6A1Q86UG4 719 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 OR5AK3PQ8NH89 298 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 ZDHHC12Q96GR4 267 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 B3GAT2Q9NPZ5 323 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 VSTM5A8MXK1 200 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 LOC730098B7Z3J9 87 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 DNAJB1P25685 340 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 ZDHHC24Q6UX98 284 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 FEM1AQ9BSK4 669 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 VRTNQ9H8Y1 702 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 EPOP01588 193 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 GKP32189 559 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 PTCHD3Q3KNS1 767 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 PLEKHS1Q5SXH7 462 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 TRPV1Q8NER1 839 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 PLEKHO2Q8TD55 490 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 TMEM125Q96AQ2 219 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 METTL7AQ9H8H3 244 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 GALPQ9UBC7 116 aa24.4■■□□□ 1.5
SPIRE1-202ENST00000409402 A8MUI8 341 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 CLIC1O00299 241 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 ENGP17813 658 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 EDNRBP24530 442 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 RAB8AP61006 207 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 CCINQ13939 588 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 GANABQ14697 944 aaKnown RBP24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 KLHL22Q53GT1 634 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 DCAF12L1Q5VU92 463 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 CILP2Q8IUL8 1156 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 OR5K1Q8NHB7 308 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 POLR2J3Q9H1A7 115 aaKnown RBP24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 SPIN1Q9Y657 262 aaPredicted RBP24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 ZNF142P52746 1687 aaPredicted RBP24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 WASHC1A8K0Z3 465 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 WASH3PC4AMC7 463 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 BMPR1AP36894 532 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 KCNJ5P48544 419 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 WASH2PQ6VEQ5 465 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 Q6ZVL8 140 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 ADGRD2Q7Z7M1 963 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 OR2L5Q8NG80 312 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 OR4F6Q8NGB9 312 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 OR6K6Q8NGW6 343 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 LDAHQ9H6V9 325 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 AKTIPQ9H8T0 292 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 ZIM2Q9NZV7 527 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 SUSD2Q9UGT4 822 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 ING4Q9UNL4 249 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 CAND1Q86VP6 1230 aaKnown RBP24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 OR56A1Q8NGH5 318 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 WDR92Q96MX6 357 aa24.39■■□□□ 1.5
SPIRE1-202ENST00000409402 C2orf74A8MZ97 194 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 VEGFDO43915 354 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 C6orf52Q5T4I8 152 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 OR4F3Q6IEY1 312 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 KLHL6Q8WZ60 621 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 ARMC5Q96C12 935 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 C8orf33Q9H7E9 229 aaPredicted RBP24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 PCDHGB5Q9Y5G0 923 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 A0A1W2PP55 124 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 ZNF208O43345 1280 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 CYBAP13498 195 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 POLR2CP19387 275 aaPredicted RBP24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 FECHP22830 423 aa24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 RNASE12Q5GAN4 147 aaKnown RBP24.39■■□□□ 1.49
SPIRE1-202ENST00000409402 CXorf49A8MYA2 514 aaPredicted RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 JUNP05412 331 aaKnown RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 DUOXA1Q1HG43 343 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 HEXBP07686 556 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 RBM20Q5T481 1227 aaKnown RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 CHID1Q9BWS9 393 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 WDR12Q9GZL7 423 aaKnown RBP24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 KCNH6Q9H252 994 aa24.38■■□□□ 1.49
SPIRE1-202ENST00000409402 HRASLS2Q9NWW9 162 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms