RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 OR2L3Q8NG85 312 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 OR2A1Q8NGT9 310 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 STT3BQ8TCJ2 826 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 SKA2Q8WVK7 121 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 FAR1Q8WVX9 515 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 C1orf54Q8WWF1 131 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 MIEF2Q96C03 454 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 CNDP1Q96KN2 507 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 LMF1Q96S06 567 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 MIPEPQ99797 713 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 CRB3Q9BUF7 120 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 PAK5Q9P286 719 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 ZC3H7BQ9UGR2 993 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 GNPTGQ9UJJ9 305 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 OSGIN2Q9Y236 505 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 NFS1Q9Y697 457 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 FAM169AQ9Y6X4 670 aa8.75□□□□□ -1.01
NIF3L1-203ENST00000409129 ANKRD12Q6UB98 2062 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 SNRNP200O75643 2136 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 CNTRLQ7Z7A1 2325 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 A0A0J9YVX5 310 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 A0A1W2PPV9 198 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 E2F3O00716 465 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 ZG16O60844 167 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 NDUFS3O75489 264 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 KLHL18O94889 574 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 HPP00738 406 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 EIF2S1P05198 315 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 ZGLP1P0C6A0 271 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 ZSCAN5DPP0CG00 497 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 ACPPP15309 386 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 RPS3P23396 243 aaKnown RBP eCLIP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 PSMB5P28074 263 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 RPL22P35268 128 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 BDKRB1P46663 353 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 NPY2RP49146 381 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 PER3P56645 1201 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 SESN2P58004 480 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 MFAP5Q13361 173 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 ATG9BQ674R7 924 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 RPUSD3Q6P087 351 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 PRMT9Q6P2P2 845 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 FBXO42Q6P3S6 717 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 LINC00696Q6ZRV3 163 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 RNF44Q7L0R7 432 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 SLC13A5Q86YT5 568 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 TMEM139Q8IV31 216 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 PRSS58Q8IYP2 241 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 MPP5Q8N3R9 675 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 RNF10Q8N5U6 811 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 CCDC89Q8N998 374 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 CATSPER1Q8NEC5 780 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 MAGEC3Q8TD91 643 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 FOPNLQ96NB1 174 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 MESP1Q9BRJ9 268 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 DESI2Q9BSY9 194 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 ZNF160Q9HCG1 818 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 TREX1Q9NSU2 369 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 STOX2Q9P2F5 926 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 ZNF282Q9UDV7 671 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 RUVBL2Q9Y230 463 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 CAPN6Q9Y6Q1 641 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 ACANP16112 2415 aa8.74□□□□□ -1.01
NIF3L1-203ENST00000409129 PCM1Q15154 2024 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 NUP210LQ5VU65 1888 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 IGLV3-12A0A075B6K2 115 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 OR2A25A4D2G3 310 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 KRT87PA6NCN2 255 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 AP3B1O00203 1094 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 MAP2K7O14733 419 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 NRP2O60462 931 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 USP1O94782 785 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 MATN4O95460 622 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 ERVK-10P10266 1014 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 NMBRP28336 390 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 CMPK1P30085 196 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 FMO4P31512 558 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 EIF3BP55884 814 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 YBX1P67809 324 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 CRADDP78560 199 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 FASTKQ14296 549 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 NAA25Q14CX7 972 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 ZRSR2Q15696 482 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 CCNG2Q16589 344 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 MUM1Q2TAK8 710 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 PRTGQ2VWP7 1150 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 VWA2Q5GFL6 755 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 CTSL3PQ5NE16 218 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 CNSTQ6PJW8 725 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 FAM180AQ6UWF9 173 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 NDUFAF7Q7L592 441 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 SDCCAG8Q86SQ7 713 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 KBTBD2Q8IY47 623 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 OR1N1Q8NGS0 311 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 C8orf44Q96CB5 159 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 BIRC8Q96P09 236 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 ZFYVE21Q9BQ24 234 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 DPH7Q9BTV6 452 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 IL22Q9GZX6 179 aa8.73□□□□□ -1.01
NIF3L1-203ENST00000409129 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms