RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 ZSCAN4Q8NAM6 433 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 KATNBL1Q9H079 304 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF696Q9H7X3 374 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ZBTB26Q9HCK0 441 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MRPS30Q9NP92 439 aaKnown RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MEPEQ9NQ76 525 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CHRAC1Q9NRG0 131 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 IMP3Q9NV31 184 aaKnown RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 RDH8Q9NYR8 311 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 A0A0J9YVX5 310 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 LOC100130705A0A1B0GUX0 176 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF726A6NNF4 738 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 B8ZZF3 427 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 FKTNO75072 461 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 RP2O75695 350 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CNTN5O94779 1100 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 LRATO95237 230 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PFKLP17858 780 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MATN1P21941 496 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 S100PP25815 95 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 BMP8BP34820 402 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ACTR1BP42025 376 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 HSPA7P48741 367 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ACTA2P62736 377 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ACTG2P63267 376 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CRHR2Q13324 411 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 VGLL4Q14135 290 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ABRAXAS2Q15018 415 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 FAM174BQ3ZCQ3 159 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ALG10Q5BKT4 473 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 IDNKQ5T6J7 187 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PRPF38BQ5VTL8 546 aaKnown RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 LIPJQ5W064 366 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 EEF1DP3Q658K8 133 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 AADACL2Q6P093 401 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 KCTD18Q6PI47 426 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 LBX2Q6XYB7 198 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 BMP8AQ7Z5Y6 402 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 AMZ2Q86W34 360 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CCDC28AQ8IWP9 274 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF615Q8N8J6 731 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 SLAIN1Q8ND83 568 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 TOR1AIP2Q8NFQ8 470 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PLEKHO2Q8TD55 490 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 FBXL18Q96ME1 805 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 TSGA13Q96PP4 275 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CITED4Q96RK1 184 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 KCNH6Q9H252 994 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 EBF3Q9H4W6 596 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 Q9N2J8 555 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 BPIFA1Q9NP55 256 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 SLC7A8Q9UHI5 535 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 TMA7Q9Y2S6 64 aaKnown RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ABCC6O95255 1503 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 A0A0G2JMP0 313 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PRSS51A0A1B0GVH4 220 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 HYKKA2RU49 373 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PRAF2O60831 178 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 SOCS5O75159 536 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 NPR2P20594 1047 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 FSHRP23945 695 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 WEE1P30291 646 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 TAS2R39P59534 338 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ERVK-21P61565 698 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CYCSP99999 105 aaKnown RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 KCNJ11Q14654 390 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 IL17AQ16552 155 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ACSBG2Q5FVE4 666 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 UBXN11Q5T124 520 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 RNF19BQ6ZMZ0 732 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 GHDCQ8N2G8 530 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MS4A15Q8N5U1 240 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 OR4M2Q8NGB6 313 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CENPOQ9BU64 300 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PDGFDQ9GZP0 370 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CPNE5Q9HCH3 593 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PRODH2Q9UF12 536 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 SIX4Q9UIU6 781 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 RNF6Q9Y252 685 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MAP4K5Q9Y4K4 846 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 DNM1LO00429 736 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PGLSO95336 258 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF182P17025 639 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ITPKAP23677 461 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ITGA3P26006 1051 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 TNFSF9P41273 254 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 NDUFV1P49821 464 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 SP3Q02447 781 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 GBE1Q04446 702 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MAD2L1BPQ15013 274 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 AKIRIN2Q53H80 203 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MOB2Q70IA6 237 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 DEFB128Q7Z7B8 93 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MARCH9Q86YJ5 346 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 RBM12BQ8IXT5 1001 aaKnown RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CMTR2Q8IYT2 770 aaKnown RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 MFSD2AQ8NA29 543 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 TRAPPC12Q8WVT3 735 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 KCNJ9Q92806 393 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 EXOSC8Q96B26 276 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms