RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 AQP11Q8NBQ7 271 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 CCDC107Q8WV48 283 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 FAM120CQ9NX05 1096 aaKnown RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 FNIP2Q9P278 1114 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 SRRDQ9UH36 339 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 INTS6Q9UL03 887 aaKnown RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 RIPK3Q9Y572 518 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 LILRA4P59901 499 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 TAF1CQ15572 869 aaPredicted RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 TMEM17Q86X19 198 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 WDTC1Q8N5D0 677 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 RFT1Q96AA3 541 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 SNX18Q96RF0 628 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 MCMBPQ9BTE3 642 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 TPT1P8Q9HAU6 139 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 MTMR10Q9NXD2 777 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 HLA-DQA2P01906 255 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF26P17031 533 aaPredicted RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 GADD45AP24522 165 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 SMSP52788 366 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 INHBCP55103 352 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 UGT8Q16880 541 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 OR10H4Q8NGA5 316 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF382Q96SR6 550 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 SLC35C2Q9NQQ7 365 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 H1F0P07305 194 aaKnown RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 SRPRAP08240 638 aaKnown RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 AP2S1P53680 142 aaPredicted RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 SHQ1Q6PI26 577 aaKnown RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 TMEM102Q8N9M5 508 aaPredicted RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 LMAN2LQ9H0V9 348 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 KCNH6Q9H252 994 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 ZDHHC6Q9H6R6 413 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 NUFIP1Q9UHK0 495 aaKnown RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 OR2AT4A6NND4 320 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 STSP08842 583 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 APOFQ13790 326 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 NDUFA9Q16795 377 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 C1orf216Q8TAB5 229 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 CAMK1GQ96NX5 476 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 DPCDQ9BVM2 203 aaPredicted RBP17.21■□□□□ 0.35
SMPD4-202ENST00000409031 SPATA9Q9BWV2 254 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 NAA50Q9GZZ1 169 aaKnown RBP17.21■□□□□ 0.35
SMPD4-202ENST00000409031 RNF121Q9H920 327 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 TRAV6A0A075B6T7 132 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 OPN1SWP03999 348 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 GGT1P19440 569 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 CRHBPP24387 322 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 PCDH1Q08174 1060 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF252P-AS1Q0IIN9 211 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 ATP13A5Q4VNC0 1218 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 HAGHLQ6PII5 290 aaPredicted RBP17.21■□□□□ 0.35
SMPD4-202ENST00000409031 LILRA2Q8N149 483 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 SNAPC3Q92966 411 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.35
SMPD4-202ENST00000409031 ALG5Q9Y673 324 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 MYH3P11055 1940 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 KDM4FA0A1W2PPD8 638 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 ENPP3O14638 875 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 SAGP10523 405 aaPredicted RBP17.21■□□□□ 0.35
SMPD4-202ENST00000409031 CHRNB1P11230 501 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 FUT4P22083 530 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 IL32P24001 234 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 UQCRC1P31930 480 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 SLC10A7Q0GE19 358 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 LRP8Q14114 963 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 CRY2Q49AN0 593 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 SNAP47Q5SQN1 464 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF467Q7Z7K2 595 aaPredicted RBP17.21■□□□□ 0.35
SMPD4-202ENST00000409031 FAM109AQ8N4B1 249 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 SIMC1Q8NDZ2 872 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 AP2M1Q96CW1 435 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 VPS29Q9UBQ0 182 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 PCDHGC4Q9Y5F7 938 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 TRBC2A0A5B9 178 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 ARVCFO00192 962 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 RP2O75695 350 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 SNRPD2P62316 118 aaKnown RBP17.21■□□□□ 0.35
SMPD4-202ENST00000409031 SPHARQ15513 63 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 PROX2Q3B8N5 592 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 C9orf64Q5T6V5 341 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF599Q96NL3 588 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 PPIEQ9UNP9 301 aaKnown RBP17.21■□□□□ 0.35
SMPD4-202ENST00000409031 DNAJC15Q9Y5T4 150 aa17.21■□□□□ 0.35
SMPD4-202ENST00000409031 KMOO15229 486 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 TLX2O43763 284 aaPredicted RBP17.2■□□□□ 0.34
SMPD4-202ENST00000409031 ITGA10O75578 1167 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 HIST1H2ABP04908 130 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 MAGEA6P43360 314 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 ARF5P84085 180 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CYBRD1Q53TN4 286 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 MEDAGQ5VYS4 303 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 LINC00299Q6ZSB3 139 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 HIST3H2AQ7L7L0 130 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 CHCHD4Q8N4Q1 142 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 OR13F1Q8NGS4 319 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 HIST1H2ACQ93077 130 aa17.2■□□□□ 0.34
SMPD4-202ENST00000409031 S100A13Q99584 98 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms