RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 TPSD1Q9BZJ3 242 aa16.07■□□□□ 0.16
CBX6-202ENST00000407418 IFT46Q9NQC8 304 aa16.07■□□□□ 0.16
CBX6-202ENST00000407418 PRODH2Q9UF12 536 aa16.07■□□□□ 0.16
CBX6-202ENST00000407418 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
CBX6-202ENST00000407418 CER1O95813 267 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 PRPS1L1P21108 318 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 VSX2P58304 361 aaPredicted RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 TMEM115Q12893 351 aaPredicted RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 LYSMD4Q5XG99 296 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 ADGRD2Q7Z7M1 963 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 HERPUD2Q9BSE4 406 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 FAM25EA8MYX2 175 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 HAT1O14929 419 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 UBAP2Q5T6F2 1119 aaKnown RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 CCDC80Q76M96 950 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 NXPE1Q8N323 547 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 COX4I2Q96KJ9 171 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 DEFB126Q9BYW3 111 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 PCDHGB1Q9Y5G3 927 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 ROR2Q01974 943 aaKnown RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 ELAVL3Q14576 367 aaKnown RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 GPRC6AQ5T6X5 926 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 CRELD2Q6UXH1 353 aaPredicted RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 NAPRTQ6XQN6 538 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 FAM110BQ8TC76 370 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 GIPC3Q8TF64 312 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 EZH1Q92800 747 aaPredicted RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 RELTQ969Z4 430 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 TEPSINQ96N21 525 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 GFM1Q96RP9 751 aaKnown RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 OR6C74A6NCV1 312 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 MYADML2A6NDP7 307 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 ZNF623O75123 536 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 GADD45GO95257 159 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 ERCC1P07992 297 aaPredicted RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 DPYSQ14117 519 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 PLEKHS1Q5SXH7 462 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 ANKRD22Q5VYY1 191 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 SMARCD3Q6STE5 483 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 PGLSO95336 258 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 CDH12P55289 794 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 CTBP2P56545 445 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 DSTNP60981 165 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 SF3B4Q15427 424 aaKnown RBP eCLIP16.06■□□□□ 0.169e-18■■■■■ 35.7
CBX6-202ENST00000407418 PDPRQ8NCN5 879 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 CPNE2Q96FN4 548 aaPredicted RBP16.06■□□□□ 0.16
CBX6-202ENST00000407418 PPM1HQ9ULR3 514 aa16.06■□□□□ 0.16
CBX6-202ENST00000407418 MATN2O00339 956 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 RPL5P46777 297 aaKnown RBP16.05■□□□□ 0.16
CBX6-202ENST00000407418 HERVK_113P63132 956 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 CBX3Q13185 183 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 LPAL2Q16609 132 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 RAB43Q86YS6 212 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 PNLDC1Q8NA58 520 aaKnown RBP16.05■□□□□ 0.16
CBX6-202ENST00000407418 ERVK-6Q9BXR3 956 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 A0A1W2PRG6 482 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 SNX3O60493 162 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 BCAP31P51572 246 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 ZNF33AQ06730 810 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 GALNT5Q7Z7M9 940 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 ROPN1LQ96C74 230 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 DHRS1Q96LJ7 313 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 SLC35A5Q9BS91 424 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 PNPLA3Q9NST1 481 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 MAN2B2Q9Y2E5 1009 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 U3KQV3 271 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 OR51F1A6NGY5 319 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 PDCD5O14737 125 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 CPNE3O75131 537 aaKnown RBP16.05■□□□□ 0.16
CBX6-202ENST00000407418 TULP3O75386 442 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 PRKAR1AP10644 381 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 ZNF3P17036 446 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 CLCN4P51793 760 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 RAB33AQ14088 237 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 BICRALQ6AI39 1079 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 OR2T34Q8NGX1 318 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 PHOSPHO1Q8TCT1 267 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 YIPF4Q9BSR8 244 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 PACSIN3Q9UKS6 424 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 TRIM64A6NGJ6 449 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 TPST2O60704 377 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 GJB5O95377 273 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 PAK4O96013 591 aaPredicted RBP16.05■□□□□ 0.16
CBX6-202ENST00000407418 RING1Q06587 406 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 KLF10Q13118 480 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 ARL13AQ5H913 290 aaPredicted RBP16.05■□□□□ 0.16
CBX6-202ENST00000407418 METTL27Q8N6F8 245 aaPredicted RBP16.05■□□□□ 0.16
CBX6-202ENST00000407418 OR6N1Q8NGY5 312 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 OR52J3Q8NH60 311 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 KAT2AQ92830 837 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 LGR4Q9BXB1 951 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 ARHGEF33A8MVX0 844 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 HADHBP55084 474 aaKnown RBP16.05■□□□□ 0.16
CBX6-202ENST00000407418 FRG2Q64ET8 278 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 SATL1Q86VE3 508 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 SPPL2CQ8IUH8 684 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 SMG8Q8ND04 991 aaKnown RBP16.05■□□□□ 0.16
CBX6-202ENST00000407418 PROKR2Q8NFJ6 384 aa16.05■□□□□ 0.16
CBX6-202ENST00000407418 KCNJ9Q92806 393 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms