RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PADI4Q9UM07 663 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 PCDHA9Q9Y5H5 950 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 SNX13Q9Y5W8 968 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 PLXND1Q9Y4D7 1925 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 ZNF462Q96JM2 2506 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 SMIM31A0A1B0GVY4 71 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 PPP6CO00743 305 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 GAPDHSO14556 408 aaPredicted RBP12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 ULK1O75385 1050 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 CER1O95813 267 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 UGT2B4P06133 528 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 LINGO3P0C6S8 592 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 FAM58BPP0C7Q3 252 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 CAPN3P20807 821 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 C5AR1P21730 350 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 JAK1P23458 1154 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC6A2P23975 617 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 FASP25445 335 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 AKT1P31749 480 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 GGT5P36269 586 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 GRIA3P42263 894 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 GNPDA1P46926 289 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 METAP1P53582 386 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 AP1S2P56377 157 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 DCDC1P59894 354 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 AP5B1Q2VPB7 878 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 HLA-BQ31612 363 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 IL23RQ5VWK5 629 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 TBC1D21Q8IYX1 336 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 ZNF843Q8N446 348 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 GANCQ8TET4 914 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 RHBDF1Q96CC6 855 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 EID2BQ96D98 161 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 KLHL32Q96NJ5 620 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 HAUS8Q9BT25 410 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 GPR174Q9BXC1 333 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 MRPS26Q9BYN8 205 aaKnown RBP12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 PCDHAC1Q9H158 963 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 ITM2CQ9NQX7 267 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 DYRK4Q9NR20 520 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 SMOXQ9NWM0 555 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 TOR4AQ9NXH8 423 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 NFKBIL1Q9UBC1 381 aaPredicted RBP12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 MAGEL2Q9UJ55 1249 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 SCML1Q9UN30 329 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 SNX6Q9UNH7 406 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 MAPRE3Q9UPY8 281 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 AP4B1Q9Y6B7 739 aa12.53□□□□□ -0.4
SMARCB1-203ENST00000407082 IGLV3-16A0A075B6K0 115 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 DHRS12A0PJE2 317 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 SERTM1A2A2V5 107 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 IQCF5A8MTL0 148 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 J3QKU1 62 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 PLK4O00444 970 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 NME4O00746 187 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 AKAP10O43572 662 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 KCNH1O95259 989 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 CLDN9O95484 217 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 FTH1P02794 183 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 IL6P05231 212 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 PRPS2P11908 318 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 CD1EP15812 388 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 XPAP23025 273 aaPredicted RBP12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 CD6P30203 668 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 VIPR1P32241 457 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 MSX2P35548 267 aaPredicted RBP12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 EIF2S3P41091 472 aaKnown RBP12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 HSPA7P48741 367 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 SPINT3P49223 89 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 RPIAP49247 311 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 TPMTP51580 245 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 NME5P56597 212 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 SEMG2Q02383 582 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 SFSWAPQ12872 951 aaKnown RBP12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 RALGDSQ12967 914 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 PWP1Q13610 501 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 GGTA1PQ4G0N0 100 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF805Q5CZA5 627 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 TBCELQ5QJ74 424 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 INTS11Q5TA45 600 aaKnown RBP12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 LRRC66Q68CR7 880 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 CYP20A1Q6UW02 462 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 DHRS13Q6UX07 377 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 ZBTB49Q6ZSB9 765 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 TRIM46Q7Z4K8 759 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 MCOLN3Q8TDD5 553 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 ATL1Q8WXF7 558 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 TMEM125Q96AQ2 219 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 VOPP1Q96AW1 172 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 TOE1Q96GM8 510 aaKnown RBP12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 PPP1R16AQ96I34 528 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF597Q96LX8 424 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 SMIM14Q96QK8 99 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 EPB41L1Q9H4G0 881 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 ALG2Q9H553 416 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 PARVBQ9HBI1 364 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 FBXL12Q9NXK8 326 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms