RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 RPL6Q02878 288 aaKnown RBP11.77□□□□□ -0.53
SMCR8-201ENST00000406438 HNRNPDQ14103 355 aaKnown RBP11.77□□□□□ -0.53
SMCR8-201ENST00000406438 QPCTQ16769 361 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 PDSS1Q5T2R2 415 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 SLC9A4Q6AI14 798 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 FAXDC2Q96IV6 333 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 M0R129 80 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 TGFB1I1O43294 461 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 IFNA7P01567 189 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 ST3GAL4Q11206 333 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 BRAT1Q6PJG6 821 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 CMTR2Q8IYT2 770 aaKnown RBP11.77□□□□□ -0.53
SMCR8-201ENST00000406438 TMEM156Q8N614 296 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF709Q8N972 641 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 NKD2Q969F2 451 aaPredicted RBP11.77□□□□□ -0.53
SMCR8-201ENST00000406438 ASPNQ9BXN1 380 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 CARS2Q9HA77 564 aaKnown RBP11.77□□□□□ -0.53
SMCR8-201ENST00000406438 CENPMQ9NSP4 180 aa11.77□□□□□ -0.53
SMCR8-201ENST00000406438 CSTF2P33240 577 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMCR8-201ENST00000406438 LRRTM4Q86VH4 590 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 OR4K17Q8NGC6 315 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 OR5M3Q8NGP4 307 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 OR5K1Q8NHB7 308 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 POF1BQ8WVV4 589 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 CPT1BQ92523 772 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 NCSTNQ92542 709 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 KCNC2Q96PR1 638 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 CD180Q99467 661 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 C19orf25Q9UFG5 118 aaPredicted RBP11.76□□□□□ -0.53
SMCR8-201ENST00000406438 A0A1W2PRB8 838 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 SLC7A4O43246 635 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 HSPA12AO43301 675 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 KDM4BO94953 1096 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 PIK3CBP42338 1070 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 PTP4A2Q12974 167 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 PRAMEF14Q5SWL7 426 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 PRAMEF13Q5VWM6 474 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TMEM68Q96MH6 324 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 AP1S3Q96PC3 154 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TMEM209Q96SK2 561 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TMEM168Q9H0V1 697 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 EHD1Q9H4M9 534 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 LAMP5Q9UJQ1 280 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 SLC22A1O15245 554 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 H6PDO95479 791 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TGFB1P01137 390 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 CYP11A1P05108 521 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF12P17014 697 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TMCO2Q7Z6W1 182 aaPredicted RBP11.76□□□□□ -0.53
SMCR8-201ENST00000406438 IFNL1Q8IU54 200 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 KREMEN2Q8NCW0 462 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 FAM46DQ8NEK8 389 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 THAP6Q8TBB0 222 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 THEM6Q8WUY1 208 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 ACDQ96AP0 544 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 OTUB2Q96DC9 234 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 UTS2RQ9UKP6 389 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 PCDHB3Q9Y5E6 796 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 SLIT3O75094 1523 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 PEPDP12955 493 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 HSD3B1P14060 373 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 NFATC2Q13469 925 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 HNRNPABQ99729 332 aaKnown RBP11.76□□□□□ -0.53
SMCR8-201ENST00000406438 CMKLR1Q99788 373 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TMED9Q9BVK6 235 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TRIM36Q9NQ86 728 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 KCNIP3Q9Y2W7 256 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TBX1O43435 398 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 NINJ1Q92982 152 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TNFRSF25Q93038 417 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 ADAP2Q9NPF8 381 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TNFRSF10DQ9UBN6 386 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 ASXL3Q9C0F0 2248 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 GSTM3P21266 225 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 FMO3P31513 532 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 CSKP41240 450 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 RGS19P49795 217 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 DEFA5Q01523 94 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 DECR1Q16698 335 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 FBXO43Q4G163 708 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 OGFRL1Q5TC84 451 aaPredicted RBP11.76□□□□□ -0.53
SMCR8-201ENST00000406438 ARHGAP40Q5TG30 622 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 GTPBP2Q9BX10 602 aaKnown RBP11.76□□□□□ -0.53
SMCR8-201ENST00000406438 KAT8Q9H7Z6 458 aaKnown RBP11.76□□□□□ -0.53
SMCR8-201ENST00000406438 CD320Q9NPF0 282 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 POFUT2Q9Y2G5 429 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 TMED5Q9Y3A6 229 aa11.76□□□□□ -0.53
SMCR8-201ENST00000406438 HK1P19367 917 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 GJA8P48165 433 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 ADGRE1Q14246 886 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 KIAA1161Q6NSJ0 714 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 MOB2Q70IA6 237 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 C12orf40Q86WS4 652 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 LRRC20Q8TCA0 184 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 KCTD13Q8WZ19 329 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 METTL7AQ9H8H3 244 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 CXorf21Q9HAI6 301 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 DNAJB9Q9UBS3 223 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 FKBPLQ9UIM3 349 aa11.75□□□□□ -0.53
SMCR8-201ENST00000406438 A8MUI8 341 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms