RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 FIGLAQ6QHK4 219 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 TMPRSS7Q7RTY8 843 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 TMPRSS12Q86WS5 348 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 TEX9Q8N6V9 391 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 RDH11Q8TC12 318 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 SLC41A2Q96JW4 573 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 TMEM74Q96NL1 305 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 PCBD2Q9H0N5 130 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 ZNF768Q9H5H4 540 aaKnown RBP15.33■□□□□ 0.04
HMGA1-204ENST00000401473 MLXIPLQ9NP71 852 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 TNPO3Q9Y5L0 923 aaKnown RBP15.33■□□□□ 0.04
HMGA1-204ENST00000401473 KCNE2Q9Y6J6 123 aa15.33■□□□□ 0.04
HMGA1-204ENST00000401473 TM9SF1O15321 606 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 ZBTB11O95625 1053 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-204ENST00000401473 ANKRD34CP0C6C1 535 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 DHRS4L1P0CG22 281 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 CDH1P12830 882 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 NELFEP18615 380 aaKnown RBP15.32■□□□□ 0.04
HMGA1-204ENST00000401473 CMPK1P30085 196 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 ALDH3A1P30838 453 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 CDH13P55290 713 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 WDR4P57081 412 aaKnown RBP15.32■□□□□ 0.04
HMGA1-204ENST00000401473 HERVK_113P63132 956 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 SH3BP2P78314 561 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 UNC50Q53HI1 259 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 ZNF425Q6IV72 752 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 FBXO42Q6P3S6 717 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 C17orf64Q86WR6 236 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 ZUFSPQ96AP4 578 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 FCRL4Q96PJ5 515 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 HAUS8Q9BT25 410 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 C1QTNF3Q9BXJ4 246 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 ERVK-6Q9BXR3 956 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 SYNPO2LQ9H987 977 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 DNAJC11Q9NVH1 559 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 OPTCQ9UBM4 332 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 PCTPQ9UKL6 214 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 TMCO1Q9UM00 188 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 KLK4Q9Y5K2 254 aa15.32■□□□□ 0.04
HMGA1-204ENST00000401473 A0A1B0GTL3 188 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 HMGB1P1B2RPK0 211 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-204ENST00000401473 E7EQ34 232 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 CTSVO60911 334 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 RPS17P08708 135 aaKnown RBP15.31■□□□□ 0.04
HMGA1-204ENST00000401473 TSPAN8P19075 237 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 HPDP32754 393 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-204ENST00000401473 NAGLUP54802 743 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 ABATP80404 500 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 CDC16Q13042 620 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 TRA2AQ13595 282 aaKnown RBP eCLIP15.31■□□□□ 0.04
HMGA1-204ENST00000401473 PDK4Q16654 411 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 LRRC70Q7Z2Q7 622 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 SLC22A9Q8IVM8 553 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 CARFQ8N187 725 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 CACTIN-AS1Q8N1I8 211 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 ANKRD42Q8N9B4 389 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 ABHD11Q8NFV4 315 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 MDM1Q8TC05 714 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 PLCD4Q9BRC7 762 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 ACBD3Q9H3P7 528 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 OCIAD1Q9NX40 245 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 KLK13Q9UKR3 277 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 ADAMTS20P59510 1910 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 PMS2P1A4D2B8 440 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 OR2A25A4D2G3 310 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 WFS1O76024 890 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 SUPT7LO94864 414 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 ZWINTO95229 277 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 BPGMP07738 259 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 ADRB1P08588 477 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 CCL4P13236 92 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 FOLR1P15328 257 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 GNAZP19086 355 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 SLC18A1P54219 525 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 CSNK1G2P78368 415 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 HSD11B2P80365 405 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 MEF2AQ02078 507 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-204ENST00000401473 GTF2H2Q13888 395 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 GTF2H2CQ6P1K8 395 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 METTL2BQ6P1Q9 378 aaKnown RBP15.31■□□□□ 0.04
HMGA1-204ENST00000401473 SLCO4C1Q6ZQN7 724 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 GOLGA7Q7Z5G4 137 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 FAM129CQ86XR2 697 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 PLD3Q8IV08 490 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 D2HGDHQ8N465 521 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 C19orf47Q8N9M1 422 aaKnown RBP15.31■□□□□ 0.04
HMGA1-204ENST00000401473 ZNF740Q8NDX6 193 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 OR4K1Q8NGD4 311 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 SLC5A11Q8WWX8 675 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 L3HYPDHQ96EM0 354 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 PKNOX2Q96KN3 472 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 DEPDC7Q96QD5 511 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 SCNM1Q9BWG6 230 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 SPNS1Q9H2V7 528 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 IPPKQ9H8X2 491 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 BTRCQ9Y297 605 aa15.31■□□□□ 0.04
HMGA1-204ENST00000401473 MED19A0JLT2 244 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-204ENST00000401473 WDR91A4D1P6 747 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 OR7A17O14581 309 aa15.3■□□□□ 0.04
HMGA1-204ENST00000401473 LCMT2O60294 686 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms