RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 A0A096LPI6 279 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 SYNDIG1LA6NDD5 238 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 RGS10O43665 173 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 KLK8O60259 260 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CBFA2T3O75081 653 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 STATHP02808 62 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 ZDHHC11BP0C7U3 371 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 C21orf33P30042 268 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CHI3L1P36222 383 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 SLC13A2Q13183 592 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CBX2Q14781 532 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CPTPQ5TA50 214 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CHST9Q7L1S5 443 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 TRAPPC5Q8IUR0 188 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 TPT1P8Q9HAU6 139 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 THUMPD1Q9NXG2 353 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 ZDHHC3Q9NYG2 299 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 SAMD4AQ9UPU9 718 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 ATP11BQ9Y2G3 1177 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CEP290O15078 2479 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CNTRLQ7Z7A1 2325 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 MICAL3Q7RTP6 2002 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 ZNF236Q9UL36 1845 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 TMEM202A6NGA9 273 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 A8MU76 341 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 AREL1O15033 823 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 TBX1O43435 398 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 ALOX12P18054 663 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 MAPK1P28482 360 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 RRM2P31350 389 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 IDUAP35475 653 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 SPIBQ01892 262 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 XAF1Q6GPH4 301 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 SVOPLQ8N434 492 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 STX19Q8N4C7 294 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 PDPRQ8NCN5 879 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 SETD9Q8NE22 299 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 IGSF21Q96ID5 467 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CHCHD6Q9BRQ6 235 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 HTATIP2Q9BUP3 242 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 RIOK2Q9BVS4 552 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 PAK1IP1Q9NWT1 392 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 RIMKLBQ9ULI2 386 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 MYO16Q9Y6X6 1858 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 SUV39H1O43463 412 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 NPPAP01160 153 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 SERPINB10P48595 397 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 DGUOKQ16854 277 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 SOWAHCQ53LP3 525 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 INO80DQ53TQ3 878 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 COLEC12Q5KU26 742 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 DCAF4L2Q8NA75 395 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 GOLM1Q8NBJ4 401 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 OR4A15Q8NGL6 344 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 MCFD2Q8NI22 146 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 TCF25Q9BQ70 676 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 OR51B5Q9H339 312 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 CLMPQ9H6B4 373 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 THG1LQ9NWX6 298 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 KIAA1522Q9P206 1035 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 FAM32AQ9Y421 112 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 A0A0G2JN53 185 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 PRR23AA6NEV1 266 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 E7EQ34 232 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 SCAMP1O15126 338 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 KDELR2P33947 212 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 TMBIM6P55061 237 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 RPS3AP61247 264 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 TMEM25Q86YD3 366 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 NLGN4XQ8N0W4 816 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 LZICQ8WZA0 190 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 FATE1Q969F0 183 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 TPK1Q9H3S4 243 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 FAM83DQ9H4H8 585 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 MARCH7Q9H992 704 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 CTPS2Q9NRF8 586 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 TRIM17Q9Y577 477 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 ZSWIM8A7E2V4 1837 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 ZNF197O14709 1029 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 TPST2O60704 377 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 CYP7B1O75881 506 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 SLC10A3P09131 477 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 EPORP19235 508 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 GSTM2P28161 218 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 DAPP51397 102 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 CLDN8P56748 225 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 RPP38P78345 283 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 EPS8Q12929 822 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 ADCK2Q7Z695 626 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 CACTIN-AS1Q8N1I8 211 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 ZNF641Q96N77 438 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 DUSP26Q9BV47 211 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 KCNH6Q9H252 994 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 SLC25A13Q9UJS0 675 aa12.28□□□□□ -0.44
PPP4R1-202ENST00000400555 KPNA4O00629 521 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms