RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PIF1Q9H611 641 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CAAP1Q9H8G2 361 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 NTN4Q9HB63 628 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 USE1Q9NZ43 259 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 BTNL2Q9UIR0 455 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SAMD4AQ9UPU9 718 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DNMT3AQ9Y6K1 912 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PRRT4C9JH25 899 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 LZTS3O60299 673 aaPredicted RBP17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 LILRB5O75023 590 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SLC16A8O95907 504 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ALBP02768 609 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 EIF2DP41214 584 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ERVK-21P61565 698 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ADARB1P78563 741 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GPM6BQ13491 265 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 HIST2H2ACQ16777 129 aaPredicted RBP17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 AAK1Q2M2I8 961 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 RFX4Q33E94 735 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CYBRD1Q53TN4 286 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FAM78AQ5JUQ0 283 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TTC23Q5W5X9 447 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 HIST2H2AA3Q6FI13 130 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SLCO4C1Q6ZQN7 724 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ERN2Q76MJ5 926 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 C12orf40Q86WS4 652 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 OR9A1PQ8NGU1 263 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FAM110BQ8TC76 370 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CHTF18Q8WVB6 975 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SLC47A1Q96FL8 570 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FAM129BQ96TA1 746 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SGPP1Q9BX95 441 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SGK2Q9HBY8 427 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DZANK1Q9NVP4 752 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PCDHGB4Q9UN71 923 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DYRK1BQ9Y463 629 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PCDHGB5Q9Y5G0 923 aa17.15■□□□□ 0.34
HLA-DQB1-204ENST00000399084 MGAT4DA6NG13 374 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TMEM202A6NGA9 273 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CCDC85CA6NKD9 419 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 UPK1AO00322 258 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SOD1P00441 154 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CD22P20273 847 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 FSHRP23945 695 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TACR1P25103 407 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 HSD17B2P37059 387 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PEX19P40855 299 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MTHFRP42898 656 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ESRRGP62508 458 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GAB4Q2WGN9 574 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NPAS3Q8IXF0 933 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 LAS2Q8IYD9 372 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZCCHC7Q8N3Z6 543 aaKnown RBP17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 OR7G3Q8NG95 312 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 OR2L2Q8NH16 312 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MAGEE2Q8TD90 523 aaPredicted RBP17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SUSD6Q92537 303 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ARRDC3Q96B67 414 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RSPRY1Q96DX4 576 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PYURFQ96I23 114 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CDCA3Q99618 268 aaPredicted RBP17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 WRAP53Q9BUR4 548 aaKnown RBP17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MTG2Q9H4K7 406 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 USP22Q9UPT9 525 aa17.14■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GPR89AB7ZAQ6 455 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 E7EQ34 232 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 G3V2T6 193 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SPINT1O43278 529 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PI15O43692 258 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 EPN2O95208 641 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ALPLP05186 524 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ABCB1P08183 1280 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GPR89BP0CG08 455 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 C6P13671 934 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ATP6V1B1P15313 513 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 VIPR2P41587 438 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RGS19P49795 217 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RPS6KA3P51812 740 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PHEXP78562 749 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 VEZF1Q14119 521 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PON2Q15165 354 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 DUSP6Q16828 381 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 B3GNT6Q6ZMB0 384 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CFAP206Q8IYR0 622 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CPA6Q8N4T0 437 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TERB1Q8NA31 727 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CLHC1Q8NHS4 586 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TMBIM1Q969X1 311 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NXPE3Q969Y0 559 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MED8Q96G25 268 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 OR4K3Q96R72 315 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PANX1Q96RD7 426 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RBM4BQ9BQ04 359 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RBM4Q9BWF3 364 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RBM38Q9H0Z9 239 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 IKZF5Q9H5V7 419 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 DDX18Q9NVP1 670 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RPS6KA6Q9UK32 745 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 AK5Q9Y6K8 562 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 KIAA0100Q14667 2235 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms