RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SNX7Q9UNH6 387 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 USP3Q9Y6I4 520 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 RHPN2P1A8MT19 583 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 CREG1O75629 220 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 MPC1LP0DKB6 136 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 DSC3Q14574 896 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 TAZQ16635 292 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 C11orf88Q6PI97 169 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 TMEM126BQ8IUX1 230 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 TCEAL8Q8IYN2 117 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 COX18Q8N8Q8 333 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 OR10G2Q8NGC3 310 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 RFKQ969G6 155 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 MGME1Q9BQP7 344 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 TOGARAM1Q9Y4F4 1720 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 WASH4PA8MWX3 477 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 CHST10O43529 356 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 CBFA2T3O75081 653 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 ALAS2P22557 587 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 STAT5AP42229 794 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 TM4SF4P48230 202 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 TOMM20Q15388 145 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 NDUFAF6Q330K2 333 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 KLHDC10Q6PID8 442 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 PRR23CQ6ZRP0 262 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 SYVN1Q86TM6 617 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 MOSPD2Q8NHP6 518 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 COPS4Q9BT78 406 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 POLR2J3Q9H1A7 115 aaKnown RBP13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 IL23AQ9NPF7 189 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 ADAP2Q9NPF8 381 aa13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 CFAP20Q9Y6A4 193 aaKnown RBP13.84□□□□□ -0.19
PCDHGA11-201ENST00000398587 AFF1P51825 1210 aaKnown RBP13.83□□□□□ -0.19
PCDHGA11-201ENST00000398587 EIF4HQ15056 248 aaKnown RBP13.83□□□□□ -0.19
PCDHGA11-201ENST00000398587 ERN2Q76MJ5 926 aaKnown RBP13.83□□□□□ -0.19
PCDHGA11-201ENST00000398587 NPAS3Q8IXF0 933 aa13.83□□□□□ -0.19
PCDHGA11-201ENST00000398587 RAB7BQ96AH8 199 aa13.83□□□□□ -0.19
PCDHGA11-201ENST00000398587 OR51B5Q9H339 312 aa13.83□□□□□ -0.19
PCDHGA11-201ENST00000398587 DZANK1Q9NVP4 752 aa13.83□□□□□ -0.19
PCDHGA11-201ENST00000398587 NRAPQ86VF7 1730 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 SCN7AQ01118 1682 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 K7ERQ8 282 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 CASKO14936 926 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 TP73O15350 636 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 PRMT3O60678 531 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 GMPRP36959 345 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 ETV3P41162 512 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 RPS13P62277 151 aaKnown RBP13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 CDK6Q00534 326 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 ZNF311Q5JNZ3 666 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 KLHL17Q6TDP4 642 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 ALKAL1Q6UXT8 129 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 CADM2Q8N3J6 435 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 SCAIQ8N9R8 606 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 RAB2BQ8WUD1 216 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 GEMIN6Q8WXD5 167 aaKnown RBP13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 SAMD11Q96NU1 681 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 DHRS4Q9BTZ2 278 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 NHSQ6T4R5 1651 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 MATN4O95460 622 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 RPL10P27635 214 aaKnown RBP13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 ITPRIPL2Q3MIP1 535 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 LIPJQ5W064 366 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 KDELC1Q6UW63 502 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 IZUMO1Q8IYV9 350 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 FIBINQ8TAL6 211 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 HMGB4Q8WW32 186 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 FCGR1BQ92637 280 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 TPK1Q9H3S4 243 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 P2RX2Q9UBL9 471 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 PGRMC2O15173 223 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 HOXB2P14652 356 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 RYKP34925 604 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 CASP9P55211 416 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 GALNT1Q10472 559 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 ISCA2Q86U28 154 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 R3HDMLQ9H3Y0 253 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 KAT8Q9H7Z6 458 aaKnown RBP13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 NEUROD4Q9HD90 331 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 PHF24Q9UPV7 400 aa13.83□□□□□ -0.2
PCDHGA11-201ENST00000398587 RIIAD1A6NNX1 92 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 MCIDASD6RGH6 385 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 M0QX08 132 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 TSPAN6O43657 245 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 AIREO43918 545 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 RSL1D1O76021 490 aaKnown RBP13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 ALPPP05187 535 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 GRB7Q14451 532 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 SUZ12Q15022 739 aaKnown RBP13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 EIPR1Q53HC9 387 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 NANOGP8Q6NSW7 305 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 TRNP1Q6NT89 227 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 PDSS2Q86YH6 399 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 IPCEF1Q8WWN9 437 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 BTBD1Q9H0C5 482 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 NANOGQ9H9S0 305 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 AIG1Q9NVV5 245 aa13.82□□□□□ -0.2
PCDHGA11-201ENST00000398587 KCNK6Q9Y257 313 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms