RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FADS3Q9Y5Q0 445 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ARHGEF33A8MVX0 844 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 IFNA8P32881 189 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 HOXD12P35452 270 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 CDH13P55290 713 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TPD52P55327 224 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NUP107P57740 925 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 UAP1L1Q3KQV9 507 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 LRIT3Q3SXY7 679 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 FAM151BQ6UXP7 276 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 USP51Q70EK9 711 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 DDIASQ8IXT1 998 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 MICU2Q8IYU8 434 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 CDYL2Q8N8U2 506 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 FAIM2Q9BWQ8 316 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 URADA6NGE7 173 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 FBP2O00757 339 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 H6PDO95479 791 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SHMT2P34897 504 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TMED1Q13445 227 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TEAD2Q15562 447 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 IMPG1Q17R60 797 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SYTL3Q4VX76 610 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NOXRED1Q6NXP6 359 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 Q6ZVU0 165 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ZDHHC13Q8IUH4 622 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 RBM4BQ9BQ04 359 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 RBM4Q9BWF3 364 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 PADI2Q9Y2J8 665 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 FCF1Q9Y324 198 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SPTBN2O15020 2390 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 C2orf16Q68DN1 1984 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TRIM64BA6NI03 449 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 PPP2R1BP30154 601 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 GJA4P35212 333 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 GMPRP36959 345 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NFYCQ13952 458 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 KIF19Q2TAC6 998 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 IL27RAQ6UWB1 636 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 HORMAD1Q86X24 394 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SH3KBP1Q96B97 665 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 OR52A5Q9H2C5 316 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 RPF2Q9H7B2 306 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM247A6NEH6 219 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 MPZL2O60487 215 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SKAP2O75563 359 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 PIAS1O75925 651 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 LYNP07948 512 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 FAM58BPP0C7Q3 252 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 FPR1P21462 350 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 IDSP22304 550 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 OXTRP30559 389 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TCTN1Q2MV58 587 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 FAM109BQ6ICB4 259 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ZBTB49Q6ZSB9 765 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NUDT13Q86X67 352 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 WDR20Q8TBZ3 569 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 WFDC5Q8TCV5 224 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SGF29Q96ES7 293 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ATXN7L3BQ96GX2 97 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 HIC2Q96JB3 615 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 B3GALT6Q96L58 329 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NSMCE3Q96MG7 304 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 CD180Q99467 661 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 POT1Q9NUX5 634 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 DCAF13Q9NV06 445 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM184CQ9NVA4 438 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ADA2Q9NZK5 511 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 EPHA6Q9UF33 1036 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 CCDC195A0A1B0GUA6 201 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 KPNA3O00505 521 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SLC35G4P0C7Q5 338 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 MEF2AQ02078 507 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 PRDX1Q06830 199 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 GRSF1Q12849 480 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 UBAP2LQ14157 1087 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 YAF2Q8IY57 180 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NUS1Q96E22 293 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 PDXPQ96GD0 296 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF583Q96ND8 569 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TRMT61BQ9BVS5 477 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ABCG8Q9H221 673 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 PLCXD1Q9NUJ7 323 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 EIF2B4Q9UI10 523 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NME4O00746 187 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 MSL3P1P0C860 447 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 GGT1P19440 569 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 UGT1A4P22310 534 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 UGT1A3P35503 534 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 UGT1A5P35504 534 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 CHN2P52757 468 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 POLE2P56282 527 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 LIPEQ05469 1076 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 COX10Q12887 443 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 CHIT1Q13231 466 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 LETMD1Q6P1Q0 360 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TMIGD1Q6UXZ0 262 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 PARS2Q7L3T8 475 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 METTL4Q8N3J2 472 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 HAVCR2Q8TDQ0 301 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms