RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ABRAXAS2Q15018 415 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.42■□□□□ 0.86
CPNE1-204ENST00000397443 NXPE4Q6UWF7 544 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 TRIM73Q86UV7 250 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 KIRREL3Q8IZU9 778 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 RNF175Q8N4F7 328 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 RSC1A1Q92681 617 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 LOXL4Q96JB6 756 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 SPNS1Q9H2V7 528 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 ELOVL6Q9H5J4 265 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 HRASLS2Q9NWW9 162 aa20.42■□□□□ 0.86
CPNE1-204ENST00000397443 HEATR5BQ9P2D3 2071 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 KCNE1BA0A087WTH5 132 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 RHPN2P1A8MT19 583 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 E9PBE3 544 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 TRIM38O00635 465 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 KHNYNO15037 678 aaKnown RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 KLHL41O60662 606 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 C1GALT1C1LP0DN25 315 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 JUPP14923 745 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ATXN3P54252 364 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 LIPJQ5W064 366 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ADNP2Q6IQ32 1131 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ZNF438Q7Z4V0 828 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 RBM12BQ8IXT5 1001 aaKnown RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ARL10Q8N8L6 244 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ZNF740Q8NDX6 193 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 PLCD4Q9BRC7 762 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 MRPS30Q9NP92 439 aaKnown RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 HEY2Q9UBP5 337 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ZNF490Q9ULM2 529 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 G3BP2Q9UN86 482 aaKnown RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 PCDH15Q96QU1 1955 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ASXL3Q9C0F0 2248 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 MANBAO00462 879 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 SDHDO14521 159 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 NRP2O60462 931 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ULK1O75385 1050 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 PCNAP12004 261 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ALDH4A1P30038 563 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 PRDX1Q06830 199 aaKnown RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 ATG9BQ674R7 924 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 PTCD3Q96EY7 689 aaKnown RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 MEAF6Q9HAF1 191 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 TCF7L2Q9NQB0 619 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 GEMIN8Q9NWZ8 242 aaKnown RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 LRIT1Q9P2V4 623 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 APOBEC2Q9Y235 224 aaKnown RBP20.41■□□□□ 0.86
CPNE1-204ENST00000397443 RNF215Q9Y6U7 377 aa20.41■□□□□ 0.86
CPNE1-204ENST00000397443 PRICKLE3O43900 615 aaPredicted RBP20.4■□□□□ 0.86
CPNE1-204ENST00000397443 DFNA5O60443 496 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 AMD1P17707 334 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 PPP1CAP62136 330 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 TCF15Q12870 199 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 GGTA1PQ4G0N0 100 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 KIAA1614Q5VZ46 1190 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 GRHL2Q6ISB3 625 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 FOXR1Q6PIV2 292 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 KANSL1Q7Z3B3 1105 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 C17orf82Q86X59 251 aaPredicted RBP20.4■□□□□ 0.86
CPNE1-204ENST00000397443 PLD3Q8IV08 490 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 MINDY1Q8N5J2 469 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 EID2Q8N6I1 236 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 AVL9Q8NBF6 648 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 PRSS33Q8NF86 280 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 OR2L3Q8NG85 312 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 SELENOMQ8WWX9 145 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 PPM1MQ96MI6 270 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 MTERF1Q99551 399 aaKnown RBP20.4■□□□□ 0.86
CPNE1-204ENST00000397443 SLC29A3Q9BZD2 475 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 KLHL25Q9H0H3 589 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 ACTR10Q9NZ32 417 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 NLGN3Q9NZ94 848 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 SNX6Q9UNH7 406 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 PCDHGA5Q9Y5G8 931 aa20.4■□□□□ 0.86
CPNE1-204ENST00000397443 IGKV1-8A0A0C4DH67 115 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 FEZF1A0PJY2 475 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 UGDHO60701 494 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 SH3BGRLO75368 114 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 UBXN7O94888 489 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 PDYNP01213 254 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 KRT6AP02538 564 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 KRT6BP04259 564 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 UGT2B7P16662 529 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 HNF4AP41235 474 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 KRT6CP48668 564 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 IFT88Q13099 833 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 LSM12Q3MHD2 195 aaKnown RBP20.39■□□□□ 0.86
CPNE1-204ENST00000397443 PRR23CQ6ZRP0 262 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 ACAD11Q709F0 780 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 EFL1Q7Z2Z2 1120 aaKnown RBP20.39■□□□□ 0.86
CPNE1-204ENST00000397443 OR2T11Q8NH01 316 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 TUBGCP3Q96CW5 907 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 MARK4Q96L34 752 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 SLC6A20Q9NP91 592 aa20.39■□□□□ 0.86
CPNE1-204ENST00000397443 ALPPL2P10696 532 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 CMPK1P30085 196 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 CCR8P51685 355 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 RBBP5Q15291 538 aaKnown RBP20.39■□□□□ 0.85
CPNE1-204ENST00000397443 FRG2Q64ET8 278 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms