RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 NSMCE3Q96MG7 304 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 PLEKHG4BQ96PX9 1271 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 F2RL3Q96RI0 385 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 CGREF1Q99674 301 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 HOPXQ9BPY8 73 aaPredicted RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 SORBS1Q9BX66 1292 aaKnown RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 LRRC37AA6NMS7 1700 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 QSER1Q2KHR3 1735 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 A0A1W2PRB8 838 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 RHPN2P1A8MT19 583 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 H3BSH0 61 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 MANBAO00462 879 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 CXCR6O00574 342 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 PDYNP01213 254 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 HSPA13P48723 471 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 TRPC1P48995 793 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 ANXA11P50995 505 aaKnown RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 RUNX1T1Q06455 604 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 DYNC1I2Q13409 638 aaKnown RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 CATSPEREQ5SY80 951 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 TRIM73Q86UV7 250 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 HIPK1Q86Z02 1210 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 OR5AR1Q8NGP9 310 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 SPPL3Q8TCT6 385 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 IPCEF1Q8WWN9 437 aaPredicted RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 COL21A1Q96P44 957 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 POLMQ9NP87 494 aaPredicted RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 ATP6V1HQ9UI12 483 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 ADAMTS6Q9UKP5 1117 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 CNOT3O75175 753 aaKnown RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 SNUPNO95149 360 aaKnown RBP10.84□□□□□ -0.67
IFT140-202ENST00000397417 CCR2P41597 374 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 GSTA3Q16772 222 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 SLC5A9Q2M3M2 681 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 RFX4Q33E94 735 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 TERB1Q8NA31 727 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 LKAAEAR1Q8TD35 194 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 WFIKKN2Q8TEU8 576 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 CD244Q9BZW8 370 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 POLEQ07864 2286 aa10.84□□□□□ -0.67
IFT140-202ENST00000397417 PAPSS2O95340 614 aaPredicted RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 LYNP07948 512 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 NUDT6P53370 316 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 SH3BGRP55822 239 aaPredicted RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 ZNF33AQ06730 810 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 MTAPQ13126 283 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 CEACAM7Q14002 265 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 LASP1Q14847 261 aaKnown RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 MED22Q15528 200 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 INTS11Q5TA45 600 aaKnown RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 STEAP4Q687X5 459 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 PARS2Q7L3T8 475 aaKnown RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 ZNF605Q86T29 641 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 KDM1BQ8NB78 822 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 FAM81AQ8TBF8 368 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 CD200R1Q8TD46 325 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 LMX1AQ8TE12 382 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 MZB1Q8WU39 189 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 SEZ6LQ9BYH1 1024 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 GIN1Q9NXP7 522 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 UNC13CQ8NB66 2214 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 TMEM189-UBE2V1I3L0A0 370 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 M0QX08 132 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 ARPC2O15144 300 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 HLA-DQA2P01906 255 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 F11P03951 625 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 RB1P06400 928 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 SLC35G6P0C7Q6 338 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 ATXN1LP0C7T5 689 aaKnown RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 DBTP11182 482 aaKnown RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 TNFRSF1BP20333 461 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 CPN2P22792 545 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 S100A5P33763 92 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 RPL4P36578 427 aaKnown RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 CTSKP43235 329 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 DOC2AQ14183 400 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 GPR68Q15743 365 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 DEFB134Q4QY38 66 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 CLEC12AQ5QGZ9 265 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 DDI2Q5TDH0 399 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 DENND5AQ6IQ26 1287 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 ZDHHC21Q8IVQ6 265 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 PIK3C3Q8NEB9 887 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 ZNF483Q8TF39 744 aaPredicted RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 RBM18Q96H35 190 aaKnown RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 TOX2Q96NM4 488 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 HERC2P3Q9BVR0 1158 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 FNDC11Q9BVV2 318 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 CDV3Q9UKY7 258 aaKnown RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 CROCCQ5TZA2 2017 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 NINQ8N4C6 2090 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 CACNA1HO95180 2353 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 HMX2A2RU54 273 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 ZNF487B1APH4 448 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 MATN4O95460 622 aa10.83□□□□□ -0.68
IFT140-202ENST00000397417 MAGEA10P43363 369 aaPredicted RBP10.83□□□□□ -0.68
IFT140-202ENST00000397417 NCBP2P52298 156 aaKnown RBP eCLIP10.83□□□□□ -0.68
IFT140-202ENST00000397417 CST6Q15828 149 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms