RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CACNA1EQ15878 2313 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 TNRC6BQ9UPQ9 1833 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 LILRA5A6NI73 299 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 ZW10O43264 779 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 PRICKLE3O43900 615 aaPredicted RBP18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 SP9P0CG40 484 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 EZRP15311 586 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 MAPK1P28482 360 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 ACADVLP49748 655 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 HHEXQ03014 270 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 RELAQ04206 551 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 FASTKQ14296 549 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 ZNF423Q2M1K9 1284 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 ZC3H14Q6PJT7 736 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 TMEM26Q6ZUK4 368 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 LMNTD1Q8N9Z9 388 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 LINC01555Q8NAE3 123 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 OR6C4Q8NGE1 309 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 WDR20Q8TBZ3 569 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 SLC37A2Q8TED4 501 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 TMEM184CQ9NVA4 438 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 ASIC5Q9NY37 505 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 TAC3Q9UHF0 121 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 CAPN7Q9Y6W3 813 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 VCANP13611 3396 aa18.35■□□□□ 0.53
TSPAN4-204ENST00000397404 A0A1W2PPV9 198 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 E9PBE3 544 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 SCAMP1O15126 338 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 YY2O15391 372 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 KLHL41O60662 606 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 EML2O95834 649 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 JUNP05412 331 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 CHRM5P08912 532 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 LINC00032P0C843 101 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 ALPPL2P10696 532 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 CALB2P22676 271 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 EMX2Q04743 252 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 SF3A3Q12874 501 aaKnown RBP eCLIP18.34■□□□□ 0.533e-13■■■■■ 49.7
TSPAN4-204ENST00000397404 TSTA3Q13630 321 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 ANGPT1Q15389 498 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 ZNF542PQ5EBM4 170 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 SUSD1Q6UWL2 747 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 FAM129CQ86XR2 697 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 OR2A1Q8NGT9 310 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 IL17FQ96PD4 163 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 CCDC106Q9BWC9 280 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 MRPS30Q9NP92 439 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 PLAGL1Q9UM63 463 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 SNX7Q9UNH6 387 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 MAPRE3Q9UPY8 281 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 PCDHGA5Q9Y5G8 931 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 KLK4Q9Y5K2 254 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 GON4LQ3T8J9 2241 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 PCM1Q15154 2024 aa18.34■□□□□ 0.53
TSPAN4-204ENST00000397404 A0A1B0GVT2 93 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 PIPSLA2A3N6 862 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 SYPP08247 313 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 EPHA4P54764 986 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 BNIP1Q12981 228 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 GPR18Q14330 331 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 ABRAXAS2Q15018 415 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 HERC3Q15034 1050 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 KIF19Q2TAC6 998 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 TMIGD1Q6UXZ0 262 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 TSPEARQ8WU66 669 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 CMTM7Q96FZ5 175 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 RHBGQ9H310 441 aa18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 ACTR5Q9H9F9 607 aaPredicted RBP18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 GEMIN8Q9NWZ8 242 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 NOP53Q9NZM5 478 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-204ENST00000397404 ARHGEF17Q96PE2 2063 aaPredicted RBP18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 DYTNA2CJ06 578 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 KRT87PA6NCN2 255 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 CAPN14A8MX76 684 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 C2orf74A8MZ97 194 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 LSM1O15116 133 aaKnown RBP18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 ARFIP1P53367 373 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 BIRC2Q13490 618 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 SLBPQ14493 270 aaKnown RBP eCLIP18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 NR6A1Q15406 480 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 SLC5A12Q1EHB4 618 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 C6orf136Q5SQH8 315 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 C6orf132Q5T0Z8 1188 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 SLC23A3Q6PIS1 610 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 Q6ZSR9 355 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 OOSP2Q86WS3 158 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 DCBLD1Q8N8Z6 715 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 OR7G3Q8NG95 312 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 BRINP2Q9C0B6 783 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 ZNF385DQ9H6B1 395 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 C1orf109Q9NX04 203 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 CIDEBQ9UHD4 219 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 EIF3LQ9Y262 564 aaKnown RBP18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 BTRCQ9Y297 605 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 CCL27Q9Y4X3 112 aa18.33■□□□□ 0.52
TSPAN4-204ENST00000397404 ERICH4A6NGS2 130 aa18.32■□□□□ 0.52
TSPAN4-204ENST00000397404 UNC5CO95185 931 aa18.32■□□□□ 0.52
TSPAN4-204ENST00000397404 CER1O95813 267 aa18.32■□□□□ 0.52
TSPAN4-204ENST00000397404 PDYNP01213 254 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms