RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ADARP55265 1226 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RBM39Q14498 530 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 PLCZ1Q86YW0 608 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 AVL9Q8NBF6 648 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 AENQ8WTP8 325 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RBM4BQ9BQ04 359 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RBM4Q9BWF3 364 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 SNTG1Q9NSN8 517 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 ATXN7L1Q9ULK2 861 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RUVBL1Q9Y265 456 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 SLC22A14Q9Y267 594 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 ZSCAN5BA6NJL1 495 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 J3KR12 359 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 HLA-DQB2P05538 268 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 OR2B6P58173 313 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RPS14P62263 151 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 DSG2Q14126 1118 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 ADGRE1Q14246 886 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 CLEC20AQ6ZU45 233 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 MON1BQ7L1V2 547 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 TFAP2BQ92481 460 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 SLCO1B3Q9NPD5 702 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 B4GALT7Q9UBV7 327 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RAB28P51157 221 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 SGCAQ16586 387 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RGS21Q2M5E4 152 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 BRAT1Q6PJG6 821 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 DNM1P34Q6PK57 102 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 THOC6Q86W42 341 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 LIX1LQ8IVB5 337 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 ZFP3Q96NJ6 502 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RTKNQ9BST9 563 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 GRHPRQ9UBQ7 328 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 SYPL2Q5VXT5 272 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 GPALPP1Q8IXQ4 340 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 SLC13A3Q8WWT9 602 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 TFGQ92734 400 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 COL21A1Q96P44 957 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 GFM1Q96RP9 751 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 MAP3K3Q99759 626 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 CHCHD6Q9BRQ6 235 aa17.01■□□□□ 0.31
MCF2L-208ENST00000397030 LYARQ9NX58 379 aaKnown RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 FBXO9Q9UK97 447 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-208ENST00000397030 RNGTTO60942 597 aaKnown RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 LRCH4O75427 683 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 ABHD2P08910 425 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 CRHR1P34998 444 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 CCNHP51946 323 aaPredicted RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 ALG10Q5BKT4 473 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 SUSD3Q96L08 255 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 PHF12Q96QT6 1004 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 HSFX4A0A1B0GTS1 333 aaPredicted RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 HSFX3A0A1B0GWH4 333 aaPredicted RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 PDCD5O14737 125 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 PGLSO95336 258 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 NADKO95544 446 aaPredicted RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 PAK4O96013 591 aaPredicted RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 NR4A1P22736 598 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 CSTF1Q05048 431 aaKnown RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 GRIK2Q13002 908 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 CA9Q16790 459 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 SIRPB2Q5JXA9 342 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 SLC25A25Q6KCM7 469 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 S100ZQ8WXG8 99 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 CMTM7Q96FZ5 175 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 BACE2Q9Y5Z0 518 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 ILVBLA1L0T0 632 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 RGS10O43665 173 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 KLRC4O43908 158 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 TBC1D21Q8IYX1 336 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 P2RX2Q9UBL9 471 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 PRORSD1PA6NEY8 169 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 HAS3O00219 553 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 ASPAP45381 313 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 RFTN1Q14699 578 aaPredicted RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 SOWAHAQ2M3V2 549 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 BICRALQ6AI39 1079 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 ARL10Q8N8L6 244 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 OR2AP1Q8NGE2 309 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 DOK4Q8TEW6 326 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 ATOH1Q92858 354 aaPredicted RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 CNDP2Q96KP4 475 aaKnown RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 TM9SF2Q99805 663 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 SMURF2Q9HAU4 748 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 R3HDM2Q9Y2K5 976 aaKnown RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 CXCR6O00574 342 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 KCNJ13O60928 360 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 ITGB1P05556 798 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 GBX2P52951 348 aaPredicted RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 IRF9Q00978 393 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 SPDYCQ5MJ68 293 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 TXNDC5Q8NBS9 432 aaKnown RBP17■□□□□ 0.31
MCF2L-208ENST00000397030 LPGAT1Q92604 370 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 HTRA1Q92743 480 aa17■□□□□ 0.31
MCF2L-208ENST00000397030 DUXAA6NLW8 204 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 PPEF2O14830 753 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 MEF2AQ02078 507 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 ADNP2Q6IQ32 1131 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 TMEM121BQ9BXQ6 578 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 LRRC4CQ9HCJ2 640 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms