RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KCNC2Q96PR1 638 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 CENPOQ9BU64 300 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 ADGRE3Q9BY15 652 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 OR51E2Q9H255 320 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 THUMPD1Q9NXG2 353 aaKnown RBP13.51□□□□□ -0.25
NUP98-204ENST00000397004 PLXNB3Q9ULL4 1909 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 AGAP5A6NIR3 686 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 CLDN24A6NM45 220 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 TMEM189-UBE2V1I3L0A0 370 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 ZNF24P17028 368 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 BPIP17213 487 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 CD22P20273 847 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 S100A3P33764 101 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 KDELR2P33947 212 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 NUDT6P53370 316 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 PROX2Q3B8N5 592 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 C6orf183Q5T699 404 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 UBTD2Q8WUN7 234 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 BCL7CQ8WUZ0 217 aaPredicted RBP13.51□□□□□ -0.25
NUP98-204ENST00000397004 SH3GL1Q99961 368 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 EHD1Q9H4M9 534 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 ASB8Q9H765 288 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 PARVBQ9HBI1 364 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 PSMD11O00231 422 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 PFDN6O15212 129 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 RFPL2O75678 378 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 ALOX5P09917 674 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 DNAJA1P31689 397 aaKnown RBP13.51□□□□□ -0.25
NUP98-204ENST00000397004 KCNJ10P78508 379 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 VMACQ2NL98 169 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 FKBP9P1Q75LS8 142 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 GDPD3Q7L5L3 318 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 PARP16Q8N5Y8 322 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 MINDY2Q8NBR6 621 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 ELMO1Q92556 727 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 BHMTQ93088 406 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 REXO4Q9GZR2 422 aaKnown RBP13.51□□□□□ -0.25
NUP98-204ENST00000397004 ERVW-1Q9UQF0 538 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 SAMHD1Q9Y3Z3 626 aaKnown RBP13.51□□□□□ -0.25
NUP98-204ENST00000397004 TRBV5-4A0A0C4DH59 114 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 SLC38A8A6NNN8 435 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 GFRA2O00451 464 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 RFXANKO14593 260 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ADAMTS4O75173 837 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 FPR1P21462 350 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 CORO1AP31146 461 aaKnown RBP13.5□□□□□ -0.25
NUP98-204ENST00000397004 CASP9P55211 416 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 CHRNA6Q15825 494 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 PRSS55Q6UWB4 352 aaPredicted RBP13.5□□□□□ -0.25
NUP98-204ENST00000397004 APOLD1Q96LR9 279 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 GPR63Q9BZJ6 419 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 CLPBQ9H078 707 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 CHST8Q9H2A9 424 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ANGPTL3Q9Y5C1 460 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 OR51B4Q9Y5P0 310 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ZNF106Q9H2Y7 1883 aaKnown RBP13.5□□□□□ -0.25
NUP98-204ENST00000397004 CLIC1O00299 241 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 AP3D1O14617 1153 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 EPB42P16452 691 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 CCR7P32248 378 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 CAMK2GQ13555 558 aaPredicted RBP13.5□□□□□ -0.25
NUP98-204ENST00000397004 SMU1Q2TAY7 513 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ARMC12Q5T9G4 340 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 LRRC66Q68CR7 880 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 SERPINA11Q86U17 422 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ZBTB2Q8N680 514 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 TTPALQ9BTX7 342 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 SPC25Q9HBM1 224 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 KRT84Q9NSB2 600 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ZNF229Q9UJW7 825 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ALPK3Q96L96 1907 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 C2orf78A6NCI8 922 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 STK16O75716 305 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 CLDN9O95484 217 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 SLC10A3P09131 477 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 IRF1P10914 325 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 COL6A1P12109 1028 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 CYBAP13498 195 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 RPL17P18621 184 aaKnown RBP13.5□□□□□ -0.25
NUP98-204ENST00000397004 ACRV1P26436 265 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 AQP1P29972 269 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 TP53BP2Q13625 1128 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 KCNA10Q16322 511 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 TTLL9Q3SXZ7 439 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ZNF404Q494X3 552 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 LACC1Q8IV20 430 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 GGHQ92820 318 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 TESCQ96BS2 214 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 Q96MT0 163 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 ARHGAP39Q9C0H5 1083 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 NXF2Q9GZY0 626 aaKnown RBP13.5□□□□□ -0.25
NUP98-204ENST00000397004 RAD18Q9NS91 495 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 FBXL12Q9NXK8 326 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 GPR83Q9NYM4 423 aa13.5□□□□□ -0.25
NUP98-204ENST00000397004 MANSC4A6NHS7 340 aaPredicted RBP13.49□□□□□ -0.25
NUP98-204ENST00000397004 WDR47O94967 919 aa13.49□□□□□ -0.25
NUP98-204ENST00000397004 PTHP01270 115 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms