RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 SNX7Q9UNH6 387 aa17.05■□□□□ 0.32
TNFSF13-204ENST00000396542 PTPRQQ9UMZ3 2332 aa17.05■□□□□ 0.32
TNFSF13-204ENST00000396542 A0A096LPK6 155 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 EFSO43281 561 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 ZNF749O43361 778 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 SRPX2O60687 465 aaPredicted RBP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 LTA4HP09960 611 aaKnown RBP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 HRH2P25021 359 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 TYK2P29597 1187 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 RORAP35398 523 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 IRF9Q00978 393 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 TAF1BQ53T94 588 aaPredicted RBP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 FBXO42Q6P3S6 717 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 ZNF517Q6ZMY9 492 aaPredicted RBP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 VASH2Q86V25 355 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 GPR135Q8IZ08 494 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 IL22RA1Q8N6P7 574 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 HNRNPLLQ8WVV9 542 aaKnown RBP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 PYCR2Q96C36 320 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 RHBDF1Q96CC6 855 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 OR4K3Q96R72 315 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 HAUS8Q9BT25 410 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 ACTR5Q9H9F9 607 aaPredicted RBP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 ABCF3Q9NUQ8 709 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 TLK1Q9UKI8 766 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 SH2B3Q9UQQ2 575 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 AP1M2Q9Y6Q5 423 aa17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 MDC1Q14676 2089 aaKnown RBP17.04■□□□□ 0.32
TNFSF13-204ENST00000396542 FER1L5A0AVI2 2057 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 LOC101059948A0A1B0GTJ6 334 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 CCDC189A1A4V9 331 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 TERTO14746 1132 aaKnown RBP17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 ZSCAN9O15535 394 aaPredicted RBP17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 KRT37O76014 449 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 KLHL2O95198 593 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 EZRP15311 586 aaKnown RBP17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 TFEBP19484 476 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 GGT5P36269 586 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 SLC6A12P48065 614 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 KCNC1P48547 511 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 TMPRSS3P57727 454 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 GPS2Q13227 327 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 SRSF6Q13247 344 aaKnown RBP17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 ERCC6LQ2NKX8 1250 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 PTCHD3Q3KNS1 767 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 TCTE1Q5JU00 501 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 MANEAQ5SRI9 462 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 FRMPD2BQ6IN97 320 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 TLDC1Q6P9B6 456 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 C17orf64Q86WR6 236 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 GPSM1Q86YR5 675 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 TCAIMQ8N3R3 496 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 PDPRQ8NCN5 879 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 RHEBL1Q8TAI7 183 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 STAG3L4Q8TBR4 150 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 KCTD4Q8WVF5 259 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 SNRNP27Q8WVK2 155 aaKnown RBP17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 NXNL1Q96CM4 212 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 GPR78Q96P69 363 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 ATOH8Q96SQ7 321 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 EGFL8Q99944 293 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 ZFYVE21Q9BQ24 234 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 SELENOSQ9BQE4 189 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 ALG9Q9H6U8 611 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 SYNPO2LQ9H987 977 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 LHX9Q9NQ69 397 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 PCMTD2Q9NV79 361 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 TMEM184CQ9NVA4 438 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 PADI1Q9ULC6 663 aa17.03■□□□□ 0.32
TNFSF13-204ENST00000396542 A0A0J9YVX5 310 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 FITM1A5D6W6 292 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 TRIM49D1C9J1S8 452 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 H7BY64 318 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 KERAO60938 352 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 SNRPAP09012 282 aaKnown RBP17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 HBQ1P09105 142 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 CCNYL3P0C7X3 344 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 LIFP15018 202 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 FAM83EQ2M2I3 478 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 COL28A1Q2UY09 1125 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 LGSNQ5TDP6 509 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 ZNF385CQ66K41 422 aaPredicted RBP17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 RHBDD2Q6NTF9 364 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 DSELQ8IZU8 1212 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 CNPY4Q8N129 248 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 ABHD11Q8NFV4 315 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 AENQ8WTP8 325 aaKnown RBP17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 UBLCP1Q8WVY7 318 aaPredicted RBP17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 ALKBH8Q96BT7 664 aaKnown RBP17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 MTBPQ96DY7 904 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 CLIP3Q96DZ5 547 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 PRAP1Q96NZ9 151 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 OR2A5Q96R48 311 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 AKIRIN1Q9H9L7 192 aaPredicted RBP17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 RNF112Q9ULX5 631 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 SRPK3Q9UPE1 567 aa17.02■□□□□ 0.32
TNFSF13-204ENST00000396542 LOC105369274A0A096LPK9 316 aa17.01■□□□□ 0.31
TNFSF13-204ENST00000396542 LOC102723532A0A0G2JNH3 316 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms