RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CATSPERZQ9NTU4 200 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 AMFRQ9UKV5 643 aa16.66■□□□□ 0.26
EXOSC3-202ENST00000396521 LOC105369274A0A096LPK9 316 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 LOC102723532A0A0G2JNH3 316 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 OR5H15A6NDH6 313 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 AP3B1O00203 1094 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 PRAMEF2O60811 474 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 ANXA5P08758 320 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 RPS3P23396 243 aaKnown RBP eCLIP16.65■□□□□ 0.269e-10■■■■□ 25.3
EXOSC3-202ENST00000396521 GRNP28799 593 aaKnown RBP16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 ATP5DP30049 168 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 SLC26A3P40879 764 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 ARHGAP19Q14CB8 494 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 MYO7BQ6PIF6 2116 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 LAPTM4BQ86VI4 370 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 PRSS58Q8IYP2 241 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 OR4N4Q8N0Y3 316 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 SIRT6Q8N6T7 355 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 TUBB6Q9BUF5 446 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 PLA2G3Q9NZ20 509 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 SLC2A6Q9UGQ3 507 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 TFR2Q9UP52 801 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 TCAF1Q9Y4C2 921 aa16.65■□□□□ 0.26
EXOSC3-202ENST00000396521 CCDC168Q8NDH2 2452 aa16.64■□□□□ 0.26
EXOSC3-202ENST00000396521 ZNF839A8K0R7 811 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 IQCF5A8MTL0 148 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 PFDN6O15212 129 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 CD3EAPO15446 510 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 WDPCPO95876 746 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 CAPN3P20807 821 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 SSTR2P30874 369 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 GDF10P55107 478 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 FAM53BQ14153 422 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 KRTCAP3Q53RY4 240 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 AADACL2Q6P093 401 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 FBXO42Q6P3S6 717 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 MICALCLQ6ZW33 695 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 PEX26Q7Z412 305 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 LRRC57Q8N9N7 239 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 PPHLN1Q8NEY8 458 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 SMPDL3AQ92484 453 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 RERGQ96A58 199 aaPredicted RBP16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 C10orf90Q96M02 699 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 DPH7Q9BTV6 452 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 YIPF2Q9BWQ6 316 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 TSPY26PQ9H489 355 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 STMN3Q9NZ72 180 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 CIDEBQ9UHD4 219 aa16.64■□□□□ 0.25
EXOSC3-202ENST00000396521 PDZD2O15018 2839 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 RCCD1A6NED2 376 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 H0YGG7 62 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 H3BMM5 538 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 CDK2AP1O14519 115 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 NDUFS3O75489 264 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 CCNDBP1O95273 360 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 MED26O95402 600 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 ARF3P61204 181 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 PCID2Q5JVF3 399 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 HIBCHQ6NVY1 386 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 TMEM205Q6UW68 189 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 TXLNBQ8N3L3 684 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 CSNK1A1LQ8N752 337 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 LKAAEAR1Q8TD35 194 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 THAP3Q8WTV1 239 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 METTL21AQ8WXB1 218 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 PANX2Q96RD6 677 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 PLCD4Q9BRC7 762 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 DRC3Q9H069 523 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 P2RY12Q9H244 342 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 ETNK1Q9HBU6 452 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 FAM114A2Q9NRY5 505 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 PKDREJQ9NTG1 2253 aa16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 SNRNP200O75643 2136 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-202ENST00000396521 ADGRG4Q8IZF6 3080 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 A0A1W2PPV9 198 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 SLC19A2O60779 497 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 MATN4O95460 622 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 ERGP11308 486 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 ESRRAP11474 423 aaPredicted RBP16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 EZRP15311 586 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 PSMB5P28074 263 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 SEMA3AQ14563 771 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 NDUFA9Q16795 377 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 ANKRD20A4Q4UJ75 823 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 SDCCAG8Q86SQ7 713 aaPredicted RBP16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 KRT222Q8N1A0 295 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 OR9A1PQ8NGU1 263 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 MMABQ96EY8 250 aaPredicted RBP16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 IMMP1LQ96LU5 166 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 ZNF354BQ96LW1 612 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 ZNF778Q96MU6 729 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 MRPS30Q9NP92 439 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 C19orf25Q9UFG5 118 aaPredicted RBP16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 DUSP10Q9Y6W6 482 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 TACC2O95359 2948 aa16.62■□□□□ 0.25
EXOSC3-202ENST00000396521 GRID2IPA4D2P6 1211 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 C8orf89P0DMQ9 161 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 MST1P26927 711 aa16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 RPA3P35244 121 aaPredicted RBP16.61■□□□□ 0.25
EXOSC3-202ENST00000396521 ADARP55265 1226 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms