RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CPNE2Q96FN4 548 aaPredicted RBP8.21□□□□□ -1.09
NDE1-202ENST00000396355 HBEGFQ99075 208 aa8.21□□□□□ -1.09
NDE1-202ENST00000396355 FXYD6Q9H0Q3 95 aa8.21□□□□□ -1.09
NDE1-202ENST00000396355 TMEM168Q9H0V1 697 aa8.21□□□□□ -1.09
NDE1-202ENST00000396355 ADAMTS10Q9H324 1103 aa8.21□□□□□ -1.09
NDE1-202ENST00000396355 GPN2Q9H9Y4 310 aaPredicted RBP8.21□□□□□ -1.09
NDE1-202ENST00000396355 TREM1Q9NP99 234 aa8.21□□□□□ -1.09
NDE1-202ENST00000396355 MID1IP1Q9NPA3 183 aa8.21□□□□□ -1.09
NDE1-202ENST00000396355 TBC1D24Q9ULP9 559 aa8.21□□□□□ -1.09
NDE1-202ENST00000396355 GRIP1Q9Y3R0 1128 aa8.21□□□□□ -1.09
NDE1-202ENST00000396355 ZNF638Q14966 1978 aaKnown RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 LOC100130705A0A1B0GUX0 176 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 A0A1W2PQ45 241 aaPredicted RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 A0A1W2PQY0 241 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 OR6C74A6NCV1 312 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 ERI2A8K979 691 aaKnown RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 E7ESA3 106 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 TRDMT1O14717 391 aaKnown RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 CASKO14936 926 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 SIGLEC5O15389 551 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 HPGDSO60760 199 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 C8BP07358 591 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 ADORA3P0DMS8 318 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 CD1EP15812 388 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 KDELR1P24390 212 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 OXTRP30559 389 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 KIAA1024LP59773 190 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 IRF9Q00978 393 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 SIGLEC14Q08ET2 396 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 COTL1Q14019 142 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 PDK2Q15119 407 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 BCL2L15Q5TBC7 163 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 PNCKQ6P2M8 343 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 KANSL1Q7Z3B3 1105 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 FGD2Q7Z6J4 655 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 CFAP206Q8IYR0 622 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 SLC22A15Q8IZD6 547 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 TMEM151AQ8N4L1 468 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 LPCAT1Q8NF37 534 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 OR4D10Q8NGI6 311 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 OR5J2Q8NH18 312 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 UBA3Q8TBC4 463 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 SNX33Q8WV41 574 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 CINPQ9BW66 212 aaPredicted RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 NUSAP1Q9BXS6 441 aaKnown RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 UGT2B28Q9BY64 529 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 MRPL4Q9BYD3 311 aaKnown RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 CD93Q9NPY3 652 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 IGSF5Q9NSI5 407 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 PADI2Q9Y2J8 665 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 PRELID3BQ9Y3B1 194 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 PCDHB12Q9Y5F1 795 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 SCN1AP35498 2009 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 MUC6Q6W4X9 2439 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 VNN2O95498 520 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 IL33O95760 270 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 GSRP00390 522 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 C1QAP02745 245 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 NFICP08651 508 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 LINC00032P0C843 101 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 TXNP10599 105 aaKnown RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 ETV4P43268 484 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 MEOX2P50222 304 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 RPP38P78345 283 aaKnown RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 S100A12P80511 92 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 EMX1Q04741 257 aaPredicted RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 ILF3Q12906 894 aaKnown RBP eCLIP8.21□□□□□ -1.1
NDE1-202ENST00000396355 NCF4Q15080 339 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 ATF7IP2Q5U623 682 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 SLC30A6Q6NXT4 461 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 DET1Q7L5Y6 550 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 STRADAQ7RTN6 431 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 TMC8Q8IU68 726 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 CYP4Z2PQ8N1L4 340 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 MEIOBQ8N635 442 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 C1orf127Q8N9H9 656 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 MYDGFQ969H8 173 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 RIPOR3Q96MK2 946 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 OR51E2Q9H255 320 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 NKX2-4Q9H2Z4 354 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 ABHD16BQ9H3Z7 469 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 RNF167Q9H6Y7 350 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 CACYBPQ9HB71 228 aaKnown RBP8.21□□□□□ -1.1
NDE1-202ENST00000396355 PLAC1Q9HBJ0 212 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 ASNSD1Q9NWL6 643 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 PCDHGB3Q9Y5G1 929 aa8.21□□□□□ -1.1
NDE1-202ENST00000396355 ZSWIM8A7E2V4 1837 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ARID1BQ8NFD5 2236 aaPredicted RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 LOC102723532A0A0G2JNH3 316 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZNF705EA8MWA4 302 aaPredicted RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 C1orf196B1AJZ1 125 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 KLF11O14901 512 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 RLN2P04090 185 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 CAPNS1P04632 268 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 HMGN1P05114 100 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 FGF3P11487 239 aaPredicted RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 ARSAP15289 507 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 S100A2P29034 98 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 GRM5P41594 1212 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms