RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CUEDC1Q9NWM3 386 aaPredicted RBP18.44■□□□□ 0.54
HOXA9-202ENST00000396345 FOXJ2Q9P0K8 574 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 LGALS13Q9UHV8 139 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 PLCL2Q9UPR0 1127 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 SH2B3Q9UQQ2 575 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 SLC22A14Q9Y267 594 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 HEATR5BQ9P2D3 2071 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 OR2A25A4D2G3 310 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 H7BY64 318 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 MAP2K7O14733 419 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 WDR47O94967 919 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 GSTA1P08263 222 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 MTHFD2P13995 350 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 GFAPP14136 432 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 HRH2P25021 359 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 GDF5P43026 501 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 GABRA4P48169 554 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 KRT71Q3SY84 523 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.43■□□□□ 0.54
HOXA9-202ENST00000396345 FBXO48Q5FWF7 155 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 ZC3H12BQ5HYM0 836 aaKnown RBP18.43■□□□□ 0.54
HOXA9-202ENST00000396345 ZNF425Q6IV72 752 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 ADCK2Q7Z695 626 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 PAQR7Q86WK9 346 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 MCATQ8IVS2 390 aaKnown RBP18.43■□□□□ 0.54
HOXA9-202ENST00000396345 KLHDC8AQ8IYD2 350 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 IQCKQ8N0W5 287 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 FGF11Q92914 225 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 PRAP1Q96NZ9 151 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 MRPL46Q9H2W6 279 aaKnown RBP18.43■□□□□ 0.54
HOXA9-202ENST00000396345 TMEM184CQ9NVA4 438 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 CPSF2Q9P2I0 782 aaKnown RBP18.43■□□□□ 0.54
HOXA9-202ENST00000396345 XPR1Q9UBH6 696 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 DCDC2Q9UHG0 476 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 SERTAD3Q9UJW9 196 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 DYRK1BQ9Y463 629 aa18.43■□□□□ 0.54
HOXA9-202ENST00000396345 IGF2RP11717 2491 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 HCRTR1O43613 425 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 NRP2O60462 931 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 CTSVO60911 334 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 STK16O75716 305 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 CAPNS1P04632 268 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 CDH1P12830 882 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 HSPA7P48741 367 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 ZNF844Q08AG5 666 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 ST3GAL2Q16842 350 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 PFKFB4Q16877 469 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 SH2D5Q6ZV89 423 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 OR1L3Q8NH93 324 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 ESAMQ96AP7 390 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 ZIM3Q96PE6 472 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 FCRL4Q96PJ5 515 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 CD244Q9BZW8 370 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 TMEM216Q9P0N5 145 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 KCNE2Q9Y6J6 123 aa18.42■□□□□ 0.54
HOXA9-202ENST00000396345 FRYQ5TBA9 3013 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 A0A0J9YVX5 310 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 KLK8O60259 260 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 SMIM24O75264 130 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 CD82P27701 267 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 ALDH18A1P54886 795 aaKnown RBP18.41■□□□□ 0.54
HOXA9-202ENST00000396345 ITGA1P56199 1179 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 PWWP2BQ6NUJ5 590 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 C16orf46Q6P387 395 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 FBXO42Q6P3S6 717 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 LRIG3Q6UXM1 1119 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 RNF44Q7L0R7 432 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 UBTD2Q8WUN7 234 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 SLC5A11Q8WWX8 675 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 NEIL2Q969S2 332 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 DNAJC11Q9NVH1 559 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 PILRAQ9UKJ1 303 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 TMCO1Q9UM00 188 aa18.41■□□□□ 0.54
HOXA9-202ENST00000396345 ACACBO00763 2458 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 TMEM8BA6NDV4 472 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 TK2O00142 265 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 HAT1O14929 419 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 CCNT2O60583 730 aaKnown RBP18.4■□□□□ 0.54
HOXA9-202ENST00000396345 GLRA3O75311 464 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 OR2B3O76000 313 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 TIAF1O95411 115 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 EZRP15311 586 aaKnown RBP18.4■□□□□ 0.54
HOXA9-202ENST00000396345 KRT4P19013 534 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 CCT5P48643 541 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 AGTR2P50052 363 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 CCR8P51685 355 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 PCBP4P57723 403 aaKnown RBP18.4■□□□□ 0.54
HOXA9-202ENST00000396345 CSNK1G2P78368 415 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 RELAQ04206 551 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 SLC18A2Q05940 514 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 CDC16Q13042 620 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 SETDB1Q15047 1291 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 CEP85LQ5SZL2 805 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 LRRC70Q7Z2Q7 622 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 TRABD2AQ86V40 505 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 ZFAND4Q86XD8 727 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 TMEM126BQ8IUX1 230 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 GPR135Q8IZ08 494 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 C4orf33Q8N1A6 199 aa18.4■□□□□ 0.54
HOXA9-202ENST00000396345 SNX31Q8N9S9 440 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms