RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ANKRD46Q86W74 232 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 ZDHHC13Q8IUH4 622 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 C10orf111Q8N326 155 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 PGBD3Q8N328 593 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 NXPE3Q969Y0 559 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 AURKBQ96GD4 344 aaPredicted RBP16.26■□□□□ 0.19
NUP50-202ENST00000396096 FAM120CQ9NX05 1096 aaKnown RBP16.26■□□□□ 0.19
NUP50-202ENST00000396096 MAPRE3Q9UPY8 281 aa16.26■□□□□ 0.19
NUP50-202ENST00000396096 EDDM13A0A1B0GTR0 161 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 H3BSA7 217 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 LRATO95237 230 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 SLC16A8O95907 504 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 CST1P01037 141 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 GSNP06396 782 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 THRBP10828 461 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 PCNAP12004 261 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 CDH15P55291 814 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 GAB4Q2WGN9 574 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 HNRNPA1L2Q32P51 320 aaKnown RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 GPR155Q7Z3F1 870 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 EID3Q8N140 333 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 RNF175Q8N4F7 328 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 PJA1Q8NG27 643 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 NETO1Q8TDF5 533 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 ARRDC3Q96B67 414 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 WRAP53Q9BUR4 548 aaKnown RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 ZCCHC2Q9C0B9 1178 aaKnown RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 REXO4Q9GZR2 422 aaKnown RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 GULP1Q9UBP9 304 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 FAM8A1Q9UBU6 413 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 PDE4DIPQ5VU43 2346 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 TCF20Q9UGU0 1960 aaKnown RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 CCDC160A6NGH7 325 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 PRRT4C9JH25 899 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 G3V2T6 193 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 PAPLNO95428 1278 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 C1orf105O95561 183 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 B3GALT4O96024 378 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 PDHA2P29803 388 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 CDK9P50750 372 aaKnown RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 EPS8Q12929 822 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 OTUD3Q5T2D3 398 aaPredicted RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 C9orf64Q5T6V5 341 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 PDE12Q6L8Q7 609 aaKnown RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 ZNF551Q7Z340 670 aaPredicted RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 SPRED2Q7Z698 418 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 STK32CQ86UX6 486 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 ZCCHC7Q8N3Z6 543 aaKnown RBP16.25■□□□□ 0.19
NUP50-202ENST00000396096 OR8D1Q8WZ84 308 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 FOXJ1Q92949 421 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 NCLNQ969V3 563 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 SDCCAG3Q96C92 435 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 WDR34Q96EX3 536 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 MED8Q96G25 268 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 OSBPL10Q9BXB5 764 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 EBPLQ9BY08 206 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 SGK2Q9HBY8 427 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 PRKAG2Q9UGJ0 569 aa16.25■□□□□ 0.19
NUP50-202ENST00000396096 ALPK3Q96L96 1907 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 EVPLLA8MZ36 301 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 H3BM21 787 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 MYO1DO94832 1006 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 NFATC1O95644 943 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 CLIC3O95833 236 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 SERPINA1P01009 418 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 GPX2P18283 190 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 RPL10P27635 214 aaKnown RBP16.24■□□□□ 0.19
NUP50-202ENST00000396096 MAGEA2P43356 314 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 ASMTP46597 345 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 PPP2R2BQ00005 443 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 DPTQ07507 201 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 ACSM2AQ08AH3 577 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 EIF4HQ15056 248 aaKnown RBP16.24■□□□□ 0.19
NUP50-202ENST00000396096 CCNYL2Q5T2Q4 361 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 C10orf62Q5T681 223 aaPredicted RBP16.24■□□□□ 0.19
NUP50-202ENST00000396096 ACSM2BQ68CK6 577 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 DOK6Q6PKX4 331 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 SLCO4C1Q6ZQN7 724 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 CAMKMTQ7Z624 323 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 ADHFE1Q8IWW8 467 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 OFCC1Q8IZS5 231 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 OR7A2PQ8NGA2 310 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 TMIGD2Q96BF3 282 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 TBC1D20Q96BZ9 403 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 NUS1Q96E22 293 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 PYURFQ96I23 114 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 MPP4Q96JB8 637 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 LINC00615Q96LM1 132 aaPredicted RBP16.24■□□□□ 0.19
NUP50-202ENST00000396096 MTERF1Q99551 399 aaKnown RBP16.24■□□□□ 0.19
NUP50-202ENST00000396096 RSL24D1Q9UHA3 163 aaKnown RBP16.24■□□□□ 0.19
NUP50-202ENST00000396096 GMEB1Q9Y692 573 aa16.24■□□□□ 0.19
NUP50-202ENST00000396096 FPGTO14772 594 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 CCNDBP1O95273 360 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 METAP1P53582 386 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 RAE1P78406 368 aaKnown RBP16.23■□□□□ 0.19
NUP50-202ENST00000396096 MESP2Q0VG99 397 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 TMEM52BQ4KMG9 183 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 ERICH5Q6P6B1 374 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 XKR5Q6UX68 686 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 CLEC4FQ8N1N0 589 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms