RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 OR4K2Q8NGD2 314 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 GOT1L1Q8NHS2 421 aaPredicted RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 HEXDCQ8WVB3 486 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 ULK4Q96C45 1275 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 TRIM44Q96DX7 344 aaPredicted RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 MRFAP1L1Q96HT8 127 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 PWWP2AQ96N64 755 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 RNF157Q96PX1 679 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 TRIM45Q9H8W5 580 aaPredicted RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 CBLCQ9ULV8 474 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 MYO6Q9UM54 1294 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 CHD3Q12873 2000 aaKnown RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 SLC5A10A0PJK1 596 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 CDK2AP1O14519 115 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 LIN7AO14910 233 aaPredicted RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 NRP2O60462 931 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 CD53P19397 219 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 TFEBP19484 476 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 KIR2DL3P43628 341 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 NKX6-1P78426 367 aaPredicted RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 SNTB1Q13884 538 aaKnown RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 DAZAP2Q15038 168 aaPredicted RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 MUM1Q2TAK8 710 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 RNF44Q7L0R7 432 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 SIMC1Q8NDZ2 872 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 ZUFSPQ96AP4 578 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 MVB12AQ96EY5 273 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 ZNF830Q96NB3 372 aaPredicted RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 HAUS4Q9H6D7 363 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 SYNPO2LQ9H987 977 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 NEUROD4Q9HD90 331 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 MKKSQ9NPJ1 570 aaPredicted RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 TRPC4Q9UBN4 977 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 ZC3H7BQ9UGR2 993 aaKnown RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 CRLS1Q9UJA2 301 aa12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 TDRKHQ9Y2W6 561 aaKnown RBP12.9□□□□□ -0.34
VCPKMT-201ENST00000395859 IGHV3-20A0A0C4DH32 117 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 GABRR3A8MPY1 467 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 LGALS16A8MUM7 142 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 CFAP99D6REC4 459 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 CBFA2T2O43439 604 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 SEC24DO94855 1032 aaPredicted RBP12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 SUN1O94901 812 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 S1PR4O95977 384 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 CD9P21926 228 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 PRKCIP41743 596 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 CDKN1CP49918 316 aaPredicted RBP12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 NR0B1P51843 470 aaKnown RBP12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 TAS2R40P59535 323 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 WASHC5Q12768 1159 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 KEAP1Q14145 624 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 PDK1Q15118 436 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 APTXQ7Z2E3 356 aaKnown RBP12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 SNX20Q7Z614 316 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 LGI4Q8N135 537 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 CLDN19Q8N6F1 224 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 POGLUT1Q8NBL1 392 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 C16orf52Q8NHV5 167 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 RAPGEF5Q92565 580 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 SLC22A18Q96BI1 424 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 C19orf43Q9BQ61 176 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 FAM96AQ9H5X1 160 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 VPS37BQ9H9H4 285 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 INTS7Q9NVH2 962 aaKnown RBP12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 BEX4Q9NWD9 120 aaPredicted RBP12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 ZDHHC3Q9NYG2 299 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 ANAPC7Q9UJX3 599 aa12.89□□□□□ -0.35
VCPKMT-201ENST00000395859 ZNF487B1APH4 448 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 FOXS1O43638 330 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 SLC25A12O75746 678 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 FKBP9O95302 570 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 C8orf89P0DMQ9 161 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 NFKB1P19838 968 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 DCAF7P61962 342 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 HADHQ16836 314 aaKnown RBP12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 BTBD16Q32M84 506 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 FIGNQ5HY92 759 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 LANCL3Q6ZV70 420 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 CPEB2Q7Z5Q1 589 aaKnown RBP12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 LUZP1Q86V48 1076 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 MAP7D3Q8IWC1 876 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 SHISA5Q8N114 240 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 HORMAD2Q8N7B1 307 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 OR13C4Q8NGS5 318 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 MMP25Q9NPA2 562 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 HEY1Q9Y5J3 304 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
VCPKMT-201ENST00000395859 A0A0G2JNJ9 132 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 LRRC10BA6NIK2 292 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 RNF212BA8MTL3 300 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 H7C1Q1 480 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 WIPF1O43516 503 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 CRLF1O75462 422 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms