RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 VPS9D1Q9Y2B5 631 aa15.43■□□□□ 0.06
CXCL12-206ENST00000395795 CSAG2Q9Y5P2 127 aa15.43■□□□□ 0.06
CXCL12-206ENST00000395795 MDC1Q14676 2089 aaKnown RBP15.43■□□□□ 0.06
CXCL12-206ENST00000395795 CTAGE9A4FU28 777 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 P2RX6O15547 441 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 FOXS1O43638 330 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 IMPA1P29218 277 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 EMP3P54852 163 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 RELAQ04206 551 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 THOC5Q13769 683 aaKnown RBP15.42■□□□□ 0.06
CXCL12-206ENST00000395795 PTK6Q13882 451 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 CRYMQ14894 314 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 FAM214AQ32MH5 1076 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 IGFL2Q6UWQ7 119 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 LAPTM4BQ86VI4 370 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 LMNTD2Q8IXW0 634 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 CPNE9Q8IYJ1 553 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 AMER2Q8N7J2 671 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 AMER3Q8N944 861 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 TTC29Q8NA56 475 aaPredicted RBP15.42■□□□□ 0.06
CXCL12-206ENST00000395795 OR11G2Q8NGC1 345 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 BARD1Q99728 777 aaKnown RBP15.42■□□□□ 0.06
CXCL12-206ENST00000395795 GRPEL1Q9HAV7 217 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 MRPS30Q9NP92 439 aaKnown RBP15.42■□□□□ 0.06
CXCL12-206ENST00000395795 CUEDC1Q9NWM3 386 aaPredicted RBP15.42■□□□□ 0.06
CXCL12-206ENST00000395795 SLC17A6Q9P2U8 582 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 TAC3Q9UHF0 121 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 PCYOX1Q9UHG3 505 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 ADAMTS6Q9UKP5 1117 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 SH2B3Q9UQQ2 575 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 RUVBL1Q9Y265 456 aaKnown RBP15.42■□□□□ 0.06
CXCL12-206ENST00000395795 MAD1L1Q9Y6D9 718 aa15.42■□□□□ 0.06
CXCL12-206ENST00000395795 TCP11X1B4DZS4 312 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 E5RI56 91 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 PEX12O00623 359 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 DNALI1O14645 258 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 PFDN6O15212 129 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 TSPAN12O95859 305 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 CATP04040 527 aaKnown RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 ERVK-10P10266 1014 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 CMPK1P30085 196 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 PGGT1BP53609 377 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 DHX9Q08211 1270 aaKnown RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 HKDC1Q2TB90 917 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 RBM20Q5T481 1227 aaKnown RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 Q6ZS92 163 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 KCNMB4Q86W47 210 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 CNTN4Q8IWV2 1026 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 RAB42Q8N4Z0 105 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 CLEC1AQ8NC01 280 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 STT3BQ8TCJ2 826 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 SNRNP40Q96DI7 357 aaKnown RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 PWWP2AQ96N64 755 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 NAP1L3Q99457 506 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 NDNQ99608 321 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 ZNF304Q9HCX3 659 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 ATP13A2Q9NQ11 1180 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 FAM114A2Q9NRY5 505 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 IARS2Q9NSE4 1012 aaKnown RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 TRMT1Q9NXH9 659 aaKnown RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 NTNG1Q9Y2I2 539 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 MRPS2Q9Y399 296 aaKnown RBP15.41■□□□□ 0.06
CXCL12-206ENST00000395795 HIVEP3Q5T1R4 2406 aa15.41■□□□□ 0.06
CXCL12-206ENST00000395795 RP1L1Q8IWN7 2480 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-206ENST00000395795 ESPL1Q14674 2120 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 A0A1W2PQ72 361 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 HAT1O14929 419 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 ZGLP1P0C6A0 271 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 ENO3P13929 434 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-206ENST00000395795 PGAM1P18669 254 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 RPA3P35244 121 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-206ENST00000395795 CDKN2DP55273 166 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 KLC1Q07866 573 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 AIMP2Q13155 320 aaKnown RBP15.4■□□□□ 0.06
CXCL12-206ENST00000395795 VWA2Q5GFL6 755 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 PRAMEF13Q5VWM6 474 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 ATG9BQ674R7 924 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 PRMT9Q6P2P2 845 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 VN1R4Q7Z5H5 301 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 CUZD1Q86UP6 607 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 ATCAYQ86WG3 371 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 CREG2Q8IUH2 290 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 PLD3Q8IV08 490 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 EBNA1BP2Q99848 306 aaKnown RBP15.4■□□□□ 0.06
CXCL12-206ENST00000395795 CDC23Q9UJX2 597 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 NXT1Q9UKK6 140 aaKnown RBP15.4■□□□□ 0.06
CXCL12-206ENST00000395795 COMMD10Q9Y6G5 202 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 MAST4O15021 2626 aa15.4■□□□□ 0.06
CXCL12-206ENST00000395795 SPTAN1Q13813 2472 aaKnown RBP15.39■□□□□ 0.05
CXCL12-206ENST00000395795 SMAPO00193 183 aa15.39■□□□□ 0.05
CXCL12-206ENST00000395795 EIF3FO00303 357 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-206ENST00000395795 FFAR3O14843 346 aa15.39■□□□□ 0.05
CXCL12-206ENST00000395795 GPR42O15529 346 aa15.39■□□□□ 0.05
CXCL12-206ENST00000395795 SEMA7AO75326 666 aa15.39■□□□□ 0.05
CXCL12-206ENST00000395795 IGHEP01854 428 aa15.39■□□□□ 0.05
CXCL12-206ENST00000395795 AHSGP02765 367 aa15.39■□□□□ 0.05
CXCL12-206ENST00000395795 EIF2S1P05198 315 aaKnown RBP15.39■□□□□ 0.05
CXCL12-206ENST00000395795 PIM1P11309 404 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-206ENST00000395795 HSD17B2P37059 387 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms