RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 KLF8O95600 359 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-203ENST00000394872 FAM163BP0C2L3 166 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 PGAM2P15259 253 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 ENGP17813 658 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 XKP51811 444 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 CD47Q08722 323 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 SNTA1Q13424 505 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 FRG2Q64ET8 278 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 FRG2BQ96QU4 278 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 SLC39A3Q9BRY0 314 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 FEM1AQ9BSK4 669 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 POLR2J3Q9H1A7 115 aaKnown RBP10.13□□□□□ -0.79
COL4A6-203ENST00000394872 MED28Q9H204 178 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 BRD7Q9NPI1 651 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 TAS2R7Q9NYW3 318 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 FNIP2Q9P278 1114 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 PDE10AQ9Y233 779 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 COL14A1Q05707 1796 aaKnown RBP10.13□□□□□ -0.79
COL4A6-203ENST00000394872 JUNP05412 331 aaKnown RBP10.13□□□□□ -0.79
COL4A6-203ENST00000394872 BCHEP06276 602 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 HEXBP07686 556 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 F7P08709 466 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-203ENST00000394872 LINGO3P0C6S8 592 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 KCNE1P15382 129 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 DECR1Q16698 335 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 CRB2Q5IJ48 1285 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 RALGPS1Q5JS13 557 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 C1orf216Q8TAB5 229 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 EPYCQ99645 322 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 STRADBQ9C0K7 418 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 COQ4Q9Y3A0 265 aa10.13□□□□□ -0.79
COL4A6-203ENST00000394872 HCRTO43612 131 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 AKAP8O43823 692 aaKnown RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 AP1S2P56377 157 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 GPR17Q13304 367 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 LY6G5CQ5SRR4 150 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 KIAA1161Q6NSJ0 714 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 GPR153Q6NV75 609 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 Q9N2J8 555 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 DZANK1Q9NVP4 752 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 FLRT1Q9NZU1 646 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 GABRQQ9UN88 632 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 CYP8B1Q9UNU6 501 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 MUSKO15146 869 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 TACSTD2P09758 323 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 NR4A1P22736 598 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 DNM1P34Q6PK57 102 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF627Q7L945 461 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PIM3Q86V86 326 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 B3GNT4Q9C0J1 378 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PFDN2Q9UHV9 154 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PRDM4Q9UKN5 801 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 TULP2O00295 520 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SIX3O95343 332 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 IL33O95760 270 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 GSTT2BP0CG30 244 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ADAM8P78325 824 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PITPNAQ00169 270 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PRPF38BQ5VTL8 546 aaKnown RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 C12orf40Q86WS4 652 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PNLDC1Q8NA58 520 aaKnown RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 OR52E4Q8NGH9 312 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF461Q8TAF7 563 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PNPLA2Q96AD5 504 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 KIAA1143Q96AT1 154 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ADAD1Q96M93 576 aaKnown RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 TWNKQ96RR1 684 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 TTYH3Q9C0H2 523 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 DNAJB9Q9UBS3 223 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 AJAP1Q9UKB5 411 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PCDHB3Q9Y5E6 796 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 LSM1O15116 133 aaKnown RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 AXIN1O15169 862 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 TBX1O43435 398 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 CBFA2T3O75081 653 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SRPRAP08240 638 aaKnown RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 CHRM5P08912 532 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ECHS1P30084 290 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 BNIP1Q12981 228 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 CEP97Q8IW35 865 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 OR10G2Q8NGC3 310 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 DNAJA4Q8WW22 397 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PPP1R14BQ96C90 147 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 FBXL18Q96ME1 805 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SLC2A6Q9UGQ3 507 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 TCRBV7S3A2A0A539 114 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SHOX2O60902 331 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 CYP27C1Q4G0S4 372 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ABCA11PQ4W5N1 156 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ARSJQ5FYB0 599 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 OR4F3Q6IEY1 312 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF598Q86UK7 904 aaKnown RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 FITM2Q8N6M3 262 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF676Q8N7Q3 588 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ZSCAN1Q8NBB4 408 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SAMD11Q96NU1 681 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 TMEM165Q9HC07 324 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 IFT172Q9UG01 1749 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 CLIC1O00299 241 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms