RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PRR23BQ6ZRT6 265 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 Q6ZS52 159 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 DHDDSQ86SQ9 333 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 FAM9CQ8IZT9 166 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 ZNF687Q8N1G0 1237 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 SLC13A3Q8WWT9 602 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 APOLD1Q96LR9 279 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 INSM2Q96T92 566 aaPredicted RBP14.44□□□□□ -0.1
CCT4-201ENST00000394440 ZBTB18Q99592 522 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 TACO1Q9BSH4 297 aaKnown RBP14.44□□□□□ -0.1
CCT4-201ENST00000394440 TRIT1Q9H3H1 467 aaKnown RBP14.44□□□□□ -0.1
CCT4-201ENST00000394440 GEMIN8Q9NWZ8 242 aaKnown RBP14.44□□□□□ -0.1
CCT4-201ENST00000394440 EBF1Q9UH73 591 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 KCNK6Q9Y257 313 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 PLEKHM1Q9Y4G2 1056 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 MAGEB17A8MXT2 336 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 LATO43561 262 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 IL6P05231 212 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 HSD17B2P37059 387 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 SLBPQ14493 270 aaKnown RBP eCLIP14.44□□□□□ -0.1
CCT4-201ENST00000394440 FAM174BQ3ZCQ3 159 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 TMEM31Q5JXX7 168 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 SPANXN4Q5MJ08 99 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 NOXRED1Q6NXP6 359 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 NXPE4Q6UWF7 544 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 RIMKLAQ8IXN7 391 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 HUS1BQ8NHY5 278 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 BMFQ96LC9 184 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 NRTNQ99748 197 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 SPNS1Q9H2V7 528 aa14.44□□□□□ -0.1
CCT4-201ENST00000394440 NDRG2Q9UN36 371 aaKnown RBP14.44□□□□□ -0.1
CCT4-201ENST00000394440 TDRKHQ9Y2W6 561 aaKnown RBP14.44□□□□□ -0.1
CCT4-201ENST00000394440 PLXND1Q9Y4D7 1925 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 PRSS38A1L453 326 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 PIPSLA2A3N6 862 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 IGLV3-19P01714 112 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 PGRP06401 933 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 HNRNPA2B1P22626 353 aaKnown RBP14.43□□□□□ -0.1
CCT4-201ENST00000394440 CLDN2P57739 230 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 CTBSQ01459 385 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 TFF2Q03403 129 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 DDX39BQ13838 428 aaKnown RBP14.43□□□□□ -0.1
CCT4-201ENST00000394440 NFATC4Q14934 902 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 NANOGP8Q6NSW7 305 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 CLHC1Q8NHS4 586 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 DNAJB14Q8TBM8 379 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 TESCQ96BS2 214 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 TMEM74Q96NL1 305 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 OSGEPL1Q9H4B0 414 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 NANOGQ9H9S0 305 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 TSC22D4Q9Y3Q8 395 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 CUL9Q8IWT3 2517 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 C15orf38-AP3S2A0A0A6YYH1 394 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 LRRC72A6NJI9 287 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 C8BP07358 591 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 CHRNB1P11230 501 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 MRPS22P82650 360 aaKnown RBP14.43□□□□□ -0.1
CCT4-201ENST00000394440 TSTA3Q13630 321 aaPredicted RBP14.43□□□□□ -0.1
CCT4-201ENST00000394440 RABL3Q5HYI8 236 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 TPRG1LQ5T0D9 272 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 ARPINQ7Z6K5 226 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 FAM129CQ86XR2 697 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 HID1Q8IV36 788 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 GTF2H4Q92759 462 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 REPS1Q96D71 796 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 C12orf66Q96MD2 445 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 TSSK3Q96PN8 268 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 HAUS8Q9BT25 410 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 TRIM8Q9BZR9 551 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 NMRK1Q9NWW6 199 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 CA5BQ9Y2D0 317 aa14.43□□□□□ -0.1
CCT4-201ENST00000394440 A0A1W2PPV9 198 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 H0Y8X5 98 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 MAN2B1O00754 1011 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 FPGTO14772 594 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 CLNS1AP54105 237 aaKnown RBP14.42□□□□□ -0.1
CCT4-201ENST00000394440 ATXN3P54252 364 aaPredicted RBP14.42□□□□□ -0.1
CCT4-201ENST00000394440 PHC1P78364 1004 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 PWP1Q13610 501 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 PAGE2BQ5JRK9 111 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 ZFP1Q6P2D0 407 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 GCNT7Q6ZNI0 430 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 FANCMQ8IYD8 2048 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 HMGB4Q8WW32 186 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 EGLN2Q96KS0 407 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 ANKRD27Q96NW4 1050 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 PRDM6Q9NQX0 595 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 THEGQ9P2T0 379 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 PPT2Q9UMR5 302 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 RUVBL1Q9Y265 456 aaKnown RBP14.42□□□□□ -0.1
CCT4-201ENST00000394440 LRRC42Q9Y546 428 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 TCRBV3S1A0A5B6 114 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 FOXE1O00358 373 aaPredicted RBP14.42□□□□□ -0.1
CCT4-201ENST00000394440 IDSP22304 550 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 EEFSECP57772 596 aaKnown RBP14.42□□□□□ -0.1
CCT4-201ENST00000394440 C21orf58P58505 322 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 BNIP2Q12982 314 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 LAPTM5Q13571 262 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 CLCA4Q14CN2 919 aa14.42□□□□□ -0.1
CCT4-201ENST00000394440 SKIV2LQ15477 1246 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms