RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RAE1P78406 368 aaKnown RBP14.57□□□□□ -0.08
GPC3-202ENST00000394299 GTF2H3Q13889 308 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 NKG7Q16617 165 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 SPATS1Q496A3 300 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 GRHL2Q6ISB3 625 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 PPP4R4Q6NUP7 873 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 KIAA1211LQ6NV74 962 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 ANKRD54Q6NXT1 300 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 PNCKQ6P2M8 343 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 TBPL2Q6SJ96 375 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 ZNF765Q7L2R6 523 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 PROSER1Q86XN7 944 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 C1orf52Q8N6N3 182 aaKnown RBP14.57□□□□□ -0.08
GPC3-202ENST00000394299 ZNF740Q8NDX6 193 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 ZNF548Q8NEK5 533 aaPredicted RBP14.57□□□□□ -0.08
GPC3-202ENST00000394299 ACAT2Q9BWD1 397 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 HDAC8Q9BY41 377 aa14.57□□□□□ -0.08
GPC3-202ENST00000394299 SPATA6Q9NWH7 488 aaPredicted RBP14.57□□□□□ -0.08
GPC3-202ENST00000394299 MAGED1Q9Y5V3 778 aaPredicted RBP14.57□□□□□ -0.08
GPC3-202ENST00000394299 RNF103-CHMP3A0A140T963 221 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 ACADLP28330 430 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 TAP2Q03519 686 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 AASDHQ4L235 1098 aaPredicted RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 AGBL4Q5VU57 503 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 CLECL1Q8IZS7 167 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 OR2L2Q8NH16 312 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 CENPNQ96H22 339 aaPredicted RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 ZCCHC2Q9C0B9 1178 aaKnown RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 REXO4Q9GZR2 422 aaKnown RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 Q9H521 79 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 PDP2Q9P2J9 529 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 ADGRE2Q9UHX3 823 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 TDRKHQ9Y2W6 561 aaKnown RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 KCNE2Q9Y6J6 123 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 TRIOO75962 3097 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 H0YIV9 168 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 SCAMP1O15126 338 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 GSTA4O15217 222 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 CLIC3O95833 236 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 FUCA1P04066 466 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 ANXA6P08133 673 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 GNAO1P09471 354 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 SMIM18P0DKX4 95 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 PIM1P11309 404 aaPredicted RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 FGL2Q14314 439 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 CST6Q15828 149 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 NHSL2Q5HYW2 709 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 DSG4Q86SJ6 1040 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 GPR180Q86V85 440 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 CLEC4FQ8N1N0 589 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 HDDC3Q8N4P3 179 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 ZNF513Q8N8E2 541 aaPredicted RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 OR9A1PQ8NGU1 263 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 VPS50Q96JG6 964 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 KCNH6Q9H252 994 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 SOX17Q9H6I2 414 aaPredicted RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 KAT8Q9H7Z6 458 aaKnown RBP14.56□□□□□ -0.08
GPC3-202ENST00000394299 DZANK1Q9NVP4 752 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 MAGEL2Q9UJ55 1249 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 ASF1AQ9Y294 204 aa14.56□□□□□ -0.08
GPC3-202ENST00000394299 MGAT4DA6NG13 374 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 AXIN1O15169 862 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 UGDHO60701 494 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 TGFB1P01137 390 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 LAMP1P11279 417 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 LAMP2P13473 410 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 WNT3P56703 355 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 CDK3Q00526 305 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 ACSM2AQ08AH3 577 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 PPP1R8Q12972 351 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 HKDC1Q2TB90 917 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 IRAK1BP1Q5VVH5 260 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 ACSM2BQ68CK6 577 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 PRR23BQ6ZRT6 265 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 CHERPQ8IWX8 916 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 LRRC56Q8IYG6 542 aaPredicted RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 PAPD5Q8NDF8 572 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 COX14Q96I36 57 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 PRPF18Q99633 342 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 OSBPL6Q9BZF3 934 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 OR52A5Q9H2C5 316 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 MUC13Q9H3R2 512 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 LIMD1Q9UGP4 676 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 ELOVL7A1L3X0 281 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 RFXANKO14593 260 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 EI24O14681 340 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 CPSF4O95639 269 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 APODP05090 189 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 ATP6V1B1P15313 513 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 HNF4AP41235 474 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 GZMMP51124 257 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 IST1P53990 364 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 CSTF3Q12996 717 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 LAPTM5Q13571 262 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 SLBPQ14493 270 aaKnown RBP eCLIP14.55□□□□□ -0.08
GPC3-202ENST00000394299 THEMIS2Q5TEJ8 643 aa14.55□□□□□ -0.08
GPC3-202ENST00000394299 CAPN13Q6MZZ7 669 aaPredicted RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 TMEM214Q6NUQ4 689 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 DUS1LQ6P1R4 473 aaKnown RBP14.55□□□□□ -0.08
GPC3-202ENST00000394299 PNPT1Q8TCS8 783 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms