RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TMEM184CQ9NVA4 438 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 RNF112Q9ULX5 631 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 HEATR5BQ9P2D3 2071 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 IGKV1-8A0A0C4DH67 115 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 A0A0J9YVX5 310 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 LOC101059948A0A1B0GTJ6 334 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 H7BY64 318 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 KRT37O76014 449 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 ALDOAP04075 364 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 SNRPAP09012 282 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 NPPBP16860 134 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 GMPRP36959 345 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 STAT5AP42229 794 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 VSNL1P62760 191 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 DLG1Q12959 904 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 OR4D1Q15615 310 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 ZXDCQ2QGD7 858 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 CDKL4Q5MAI5 379 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 ZNF425Q6IV72 752 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 RNF44Q7L0R7 432 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 TCAIMQ8N3R3 496 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 ZNF655Q8N720 491 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 UBLCP1Q8WVY7 318 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 PTERQ96BW5 349 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 NXNL1Q96CM4 212 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 LRFN5Q96NI6 719 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 PRAP1Q96NZ9 151 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 ZFYVE21Q9BQ24 234 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 VPS11Q9H270 941 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 GPN2Q9H9Y4 310 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 LHX9Q9NQ69 397 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 IGSF5Q9NSI5 407 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 CUEDC1Q9NWM3 386 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 FETUBQ9UGM5 382 aa18.21■□□□□ 0.51
PDLIM7-204ENST00000393546 NCF1BA6NI72 391 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 NCF1CA8MVU1 366 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 TRIM49D1C9J1S8 452 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 H3BMH7 237 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 MEN1O00255 615 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 ZSCAN9O15535 394 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 S100BP04271 92 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 CTSBP07858 339 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 NCF1P14598 390 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 TFEBP19484 476 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 CSRP3P50461 194 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 VSX2P58304 361 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 RELAQ04206 551 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 COL28A1Q2UY09 1125 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 PTCHD3Q3KNS1 767 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 WDR93Q6P2C0 686 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 ADGRD1Q6QNK2 874 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 ISCA2Q86U28 154 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 CNPY4Q8N129 248 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 ZSCAN1Q8NBB4 408 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 SLC38A9Q8NBW4 561 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 KCTD4Q8WVF5 259 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 MR1Q95460 341 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 RHBDF1Q96CC6 855 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 NDC1Q9BTX1 674 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 DHRS4Q9BTZ2 278 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 EPB41L4BQ9H329 900 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 ALG9Q9H6U8 611 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 CPNE5Q9HCH3 593 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 CD274Q9NZQ7 290 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 SRPK3Q9UPE1 567 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 V9GYY5 206 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 CELSR3Q9NYQ7 3312 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 SEC16AO15027 2179 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 CACNA1BQ00975 2339 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 PKD1L2Q7Z442 2459 aa18.2■□□□□ 0.5
PDLIM7-204ENST00000393546 CCDC189A1A4V9 331 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 EFSO43281 561 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 NRP2O60462 931 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 KLHL2O95198 593 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 LIFP15018 202 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 EZRP15311 586 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 TCN2P20062 427 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 DLSTP36957 453 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 ARSFP54793 590 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 CXADRP78310 365 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 IRF9Q00978 393 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 VAC14Q08AM6 782 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 GPS2Q13227 327 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 SRSF6Q13247 344 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 GRM7Q14831 915 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 ERCC6LQ2NKX8 1250 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 WASHC2DQ5SRD0 308 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 SULT1C3Q6IMI6 304 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 FRMPD2BQ6IN97 320 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 KLC3Q6P597 504 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 THOC6Q86W42 341 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 DSELQ8IZU8 1212 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 CENPLQ8N0S6 344 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 TTC29Q8NA56 475 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 ISL2Q96A47 359 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 MTBPQ96DY7 904 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 ZNF285Q96NJ3 590 aa18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 CNOT10Q9H9A5 744 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-204ENST00000393546 TXLNGQ9NUQ3 528 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms