RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ERICH5Q6P6B1 374 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 THOC6Q86W42 341 aaKnown RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 TRAM1L1Q8N609 369 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 KREMEN2Q8NCW0 462 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 DDHD1Q8NEL9 900 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 BPIFB6Q8NFQ5 453 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 FBLIM1Q8WUP2 373 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 TIFAQ96CG3 184 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 CCDC138Q96M89 665 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 GPN2Q9H9Y4 310 aaPredicted RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 TM9SF3Q9HD45 589 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 IL1RAPQ9NPH3 570 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 SPATA6Q9NWH7 488 aaPredicted RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 FAM120CQ9NX05 1096 aaKnown RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 VPS29Q9UBQ0 182 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 RUVBL1Q9Y265 456 aaKnown RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 NAALAD2Q9Y3Q0 740 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 DOCK6Q96HP0 2047 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 MAGEB17A8MXT2 336 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 CCL16O15467 120 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 PSIP1O75475 530 aaKnown RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 FGF18O76093 207 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 C1QCP02747 245 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 SEMG1P04279 462 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 COX7A2P14406 83 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 GPX2P18283 190 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 IGFBP5P24593 272 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 PLA2G16P53816 162 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 C21orf58P58505 322 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 BNIP3Q12983 259 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 DMC1Q14565 340 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 OR2T5Q6IEZ7 315 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 Q6ZVL8 140 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 GPR155Q7Z3F1 870 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 ZC3H7AQ8IWR0 971 aaKnown RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 OR8J2Q8NGG1 315 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 OR2T29Q8NH02 315 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 TANKQ92844 425 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 CLP1Q92989 425 aaKnown RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 MUL1Q969V5 352 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 ZNF566Q969W8 418 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 HEPHQ9BQS7 1158 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 TRIT1Q9H3H1 467 aaKnown RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 NFKBIL1Q9UBC1 381 aaPredicted RBP11.92□□□□□ -0.5
RFC5-201ENST00000392542 RPS6KA6Q9UK32 745 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 ABCG2Q9UNQ0 655 aa11.92□□□□□ -0.5
RFC5-201ENST00000392542 OR2AG2A6NM03 316 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 E7EQ34 232 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 QSOX1O00391 747 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 PFDN1O60925 122 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 MITFO75030 526 aaPredicted RBP11.91□□□□□ -0.5
RFC5-201ENST00000392542 KCNK5O95279 499 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 CPSF4O95639 269 aaKnown RBP11.91□□□□□ -0.5
RFC5-201ENST00000392542 INHBBP09529 407 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 CCDC159P0C7I6 412 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 ETV3P41162 512 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 RANBP1P43487 201 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 WDR5P61964 334 aaKnown RBP11.91□□□□□ -0.5
RFC5-201ENST00000392542 PIGFQ07326 219 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 TMED1Q13445 227 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 GTF2H3Q13889 308 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 DOC2AQ14183 400 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 ZNF648Q5T619 568 aaPredicted RBP11.91□□□□□ -0.5
RFC5-201ENST00000392542 GRHL2Q6ISB3 625 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 ZNF621Q6ZSS3 439 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 ADIPOR2Q86V24 386 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 PTOV1Q86YD1 416 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 KLHDC8AQ8IYD2 350 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 ZNF557Q8N988 423 aaPredicted RBP11.91□□□□□ -0.5
RFC5-201ENST00000392542 PIK3C3Q8NEB9 887 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 ATL1Q8WXF7 558 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 IRF7Q92985 503 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 BORCS5Q969J3 196 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 FAM83CQ9BQN1 747 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 RIOK2Q9BVS4 552 aaKnown RBP11.91□□□□□ -0.5
RFC5-201ENST00000392542 PCDH12Q9NPG4 1184 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 RAD18Q9NS91 495 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 TMEM39AQ9NV64 488 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 FAM8A1Q9UBU6 413 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 PSME2Q9UL46 239 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 NUP214P35658 2090 aaPredicted RBP11.91□□□□□ -0.5
RFC5-201ENST00000392542 TMEM202A6NGA9 273 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 FADS2P1A8MWK0 482 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 UPK3BL1B0FP48 263 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 UPK3BL2E5RIL1 263 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 UGT2B11O75310 529 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 MYO1DO94832 1006 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 BCL10O95999 233 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 HSD3B1P14060 373 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 TYRP14679 529 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 ZNF182P17025 639 aaPredicted RBP11.91□□□□□ -0.5
RFC5-201ENST00000392542 ITIH1P19827 911 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 HSD3B2P26439 372 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 KDELR2P33947 212 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 HNF4AP41235 474 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 IL5RAQ01344 420 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 CDK5R2Q13319 367 aa11.91□□□□□ -0.5
RFC5-201ENST00000392542 DDX39BQ13838 428 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms