RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 ASNA1O43681 348 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 SPOPO43791 374 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 KDM1AO60341 852 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 SRPX2O60687 465 aaPredicted RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 CD96P40200 585 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 MAT1AQ00266 395 aaKnown RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 TUBA3CQ13748 450 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 TRIM14Q14142 442 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 LONRF1Q17RB8 773 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 HKDC1Q2TB90 917 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 KRTCAP3Q53RY4 240 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 DNAJC21Q5F1R6 531 aaKnown RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 RNFT1Q5M7Z0 435 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 ITPRIPL1Q6GPH6 555 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 TUBA3EQ6PEY2 450 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 CEP128Q6ZU80 1094 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 LANCL3Q6ZV70 420 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 TGIF2LYQ8IUE0 185 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 SIAH3Q8IW03 269 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 SLC22A15Q8IZD6 547 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 MDS2Q8NDY4 140 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 SLC22A18Q96BI1 424 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 MMABQ96EY8 250 aaPredicted RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 FRMD6Q96NE9 622 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 NPAS2Q99743 824 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 TRIM51Q9BSJ1 452 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 LIME1Q9H400 295 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 ENAMQ9NRM1 1142 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 CCM2LQ9NUG4 571 aaPredicted RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 SPTLC3Q9NUV7 552 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 ZNHIT6Q9NWK9 470 aaKnown RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 SLC39A10Q9ULF5 831 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 MKL2Q9ULH7 1088 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 RUVBL2Q9Y230 463 aaKnown RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 AAR2Q9Y312 384 aaKnown RBP11.18□□□□□ -0.62
SOD1-202ENST00000389995 FAM169AQ9Y6X4 670 aa11.18□□□□□ -0.62
SOD1-202ENST00000389995 LOC102723996A0A087X1L8 192 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 A0A0A6YYC8 382 aaPredicted RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 A0A0U1RQJ8 604 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 CCDC162PA2VCL2 907 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 HACD1B0YJ81 288 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 TARM1B6A8C7 271 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 H0YGG7 62 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 H7C0S8 307 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 I3L1I5 382 aaPredicted RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 RASGRF2O14827 1237 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 STATHP02808 62 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 MYBL2P10244 700 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 ERVK-10P10266 1014 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 MSNP26038 577 aaKnown RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 EEF1DP29692 281 aaKnown RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 BDKRB1P46663 353 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 ARF3P61204 181 aaPredicted RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 DSG2Q14126 1118 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 PRPSAP1Q14558 356 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 OR1C1Q15619 314 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 MUM1Q2TAK8 710 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 ASTE1Q2TB18 679 aaPredicted RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 PRTGQ2VWP7 1150 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 CCDC38Q502W7 563 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 ACER2Q5QJU3 275 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 FBXO42Q6P3S6 717 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 TMEM205Q6UW68 189 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 GALNTL5Q7Z4T8 443 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 CRLF3Q8IUI8 442 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 DCUN1D3Q8IWE4 304 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 ZC3H7AQ8IWR0 971 aaKnown RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 KRT222Q8N1A0 295 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 MARVELD2Q8N4S9 558 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 OR2L3Q8NG85 312 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 ZUFSPQ96AP4 578 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 ACAT2Q9BWD1 397 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 TSR3Q9UJK0 312 aaKnown RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 RUVBL1Q9Y265 456 aaKnown RBP11.17□□□□□ -0.62
SOD1-202ENST00000389995 ASB1Q9Y576 335 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 HRH3Q9Y5N1 445 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 NFS1Q9Y697 457 aa11.17□□□□□ -0.62
SOD1-202ENST00000389995 MACROD2A1Z1Q3 448 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 E9PLN8 166 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 OR56A5P0C7T3 313 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 IGFBP2P18065 325 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 FOXN2P32314 431 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 PTGER1P34995 402 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 SLC26A3P40879 764 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 FOXD4Q12950 439 aaPredicted RBP11.16□□□□□ -0.62
SOD1-202ENST00000389995 ITIH4Q14624 930 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 BTBD16Q32M84 506 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 PACS1Q6VY07 963 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 RNF44Q7L0R7 432 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 VSTM4Q8IW00 320 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 TAB3Q8N5C8 712 aaPredicted RBP11.16□□□□□ -0.62
SOD1-202ENST00000389995 OR8K1Q8NGG5 319 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 OR2A1Q8NGT9 310 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 PHF10Q8WUB8 498 aaKnown RBP11.16□□□□□ -0.62
SOD1-202ENST00000389995 SCMH1Q96GD3 660 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 VKORC1Q9BQB6 163 aa11.16□□□□□ -0.62
SOD1-202ENST00000389995 ZNF559Q9BR84 538 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms