RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 PAGE2BQ5JRK9 111 aa25.85■■□□□ 1.73
MSX1-201ENST00000382723 ICE2Q659A1 982 aa25.85■■□□□ 1.73
MSX1-201ENST00000382723 MED27Q6P2C8 311 aa25.85■■□□□ 1.73
MSX1-201ENST00000382723 HOMEZQ8IX15 550 aa25.85■■□□□ 1.73
MSX1-201ENST00000382723 FAM20CQ8IXL6 584 aa25.85■■□□□ 1.73
MSX1-201ENST00000382723 POU5F2Q8N7G0 328 aa25.85■■□□□ 1.73
MSX1-201ENST00000382723 OR7G3Q8NG95 312 aa25.85■■□□□ 1.73
MSX1-201ENST00000382723 PCDHB11Q9Y5F2 797 aa25.85■■□□□ 1.73
MSX1-201ENST00000382723 PIPSLA2A3N6 862 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 AQP9O43315 295 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 PIK3R1P27986 724 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 CPA2P48052 419 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 SQLEQ14534 574 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 SPATA19Q7Z5L4 167 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 ZNF740Q8NDX6 193 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 OR2A1Q8NGT9 310 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 OR6C2Q9NZP2 312 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 TAGLN3Q9UI15 199 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 SNX11Q9Y5W9 270 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 ZDBF2Q9HCK1 2354 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 LOC100653049A0A140TA62 436 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 KRT34O76011 436 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 CHRM5P08912 532 aaPredicted RBP25.84■■□□□ 1.73
MSX1-201ENST00000382723 PEBP1P30086 187 aaKnown RBP25.84■■□□□ 1.73
MSX1-201ENST00000382723 DIO3P55073 304 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 NME5P56597 212 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 NCALDP61601 193 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 ERVK-8P63133 956 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 HIST2H2ACQ16777 129 aaPredicted RBP25.84■■□□□ 1.73
MSX1-201ENST00000382723 HIST2H2AA3Q6FI13 130 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 OGFOD2Q6N063 350 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 PPP3R2Q96LZ3 170 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 TUBB6Q9BUF5 446 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 UCKL1Q9NWZ5 548 aa25.84■■□□□ 1.73
MSX1-201ENST00000382723 ISM1B1AKI9 464 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 H7BY64 318 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 STX1BP61266 288 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 NAA25Q14CX7 972 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 SLC9B2Q86UD5 537 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 PIGKQ92643 395 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 PRAP1Q96NZ9 151 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 PILRBQ9UKJ0 227 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 SPAG17Q6Q759 2223 aa25.83■■□□□ 1.73
MSX1-201ENST00000382723 BTN3A3O00478 584 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 SEC22BO75396 215 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 CALB2P22676 271 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 CCR8P51685 355 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 RPL38P63173 70 aaKnown RBP25.82■■□□□ 1.72
MSX1-201ENST00000382723 HHEXQ03014 270 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 PRDX1Q06830 199 aaKnown RBP25.82■■□□□ 1.72
MSX1-201ENST00000382723 LAPTM5Q13571 262 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 SF1Q15637 639 aaKnown RBP25.82■■□□□ 1.72
MSX1-201ENST00000382723 DEFB133Q30KQ1 61 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 RFTN2Q52LD8 501 aaPredicted RBP25.82■■□□□ 1.72
MSX1-201ENST00000382723 ZNF761Q86XN6 746 aaPredicted RBP25.82■■□□□ 1.72
MSX1-201ENST00000382723 ADGRF3Q8IZF5 1079 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 HUS1BQ8NHY5 278 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 REPS1Q96D71 796 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 PELI2Q9HAT8 420 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 LRTM1Q9HBL6 345 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 PRICKLE3O43900 615 aaPredicted RBP25.82■■□□□ 1.72
MSX1-201ENST00000382723 PIAS2O75928 621 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 ATP5HO75947 161 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 MAZP56270 477 aaKnown RBP25.82■■□□□ 1.72
MSX1-201ENST00000382723 RPS6KA2Q15349 733 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 ADCK2Q7Z695 626 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 OR10G6Q8NH81 332 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 ZFPM2Q8WW38 1151 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 NCOR1O75376 2440 aa25.82■■□□□ 1.72
MSX1-201ENST00000382723 PSMD12O00232 456 aaPredicted RBP25.81■■□□□ 1.72
MSX1-201ENST00000382723 SH3BGRLO75368 114 aa25.81■■□□□ 1.72
MSX1-201ENST00000382723 CTSKP43235 329 aa25.81■■□□□ 1.72
MSX1-201ENST00000382723 RBBP5Q15291 538 aaKnown RBP25.81■■□□□ 1.72
MSX1-201ENST00000382723 FAM129CQ86XR2 697 aa25.81■■□□□ 1.72
MSX1-201ENST00000382723 NELL1Q92832 810 aa25.81■■□□□ 1.72
MSX1-201ENST00000382723 CMTM5Q96DZ9 223 aa25.81■■□□□ 1.72
MSX1-201ENST00000382723 ZMYND15Q9H091 742 aa25.81■■□□□ 1.72
MSX1-201ENST00000382723 MRPS30Q9NP92 439 aaKnown RBP25.81■■□□□ 1.72
MSX1-201ENST00000382723 KNL1Q8NG31 2342 aa25.81■■□□□ 1.72
MSX1-201ENST00000382723 TDRD6O60522 2096 aaKnown RBP25.81■■□□□ 1.72
MSX1-201ENST00000382723 OR6C74A6NCV1 312 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 MAGEB17A8MXT2 336 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 SLC22A2O15244 555 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 ANXA6P08133 673 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 COX4I1P13073 169 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 IDO1P14902 403 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 AVPR2P30518 371 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 ATP4BP51164 291 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 BNC1Q01954 994 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 EMX2Q04743 252 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 GSTA3Q16772 222 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 PAOXQ6QHF9 649 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 LAS2Q8IYD9 372 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 KRT78Q8N1N4 520 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 ABHD11Q8NFV4 315 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 OR2L3Q8NG85 312 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 ACTR5Q9H9F9 607 aaPredicted RBP25.8■■□□□ 1.72
MSX1-201ENST00000382723 AIG1Q9NVV5 245 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 C1orf109Q9NX04 203 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 SUSD2Q9UGT4 822 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms