RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 SERHLQ9NQF3 203 aa20.88■□□□□ 0.93
TRIM54-202ENST00000380075 THG1LQ9NWX6 298 aaKnown RBP20.88■□□□□ 0.93
TRIM54-202ENST00000380075 AREL1O15033 823 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 PRAMEF4O60810 478 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 NEK2P51955 445 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 TMEM115Q12893 351 aaPredicted RBP20.87■□□□□ 0.93
TRIM54-202ENST00000380075 TDGQ13569 410 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 PRAMEF9Q5VWM5 478 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 ISLR2Q6UXK2 745 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 RBM44Q6ZP01 1051 aaKnown RBP20.87■□□□□ 0.93
TRIM54-202ENST00000380075 GPR180Q86V85 440 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 TRIML2Q8N7C3 387 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 SPDYE1Q8NFV5 336 aaPredicted RBP20.87■□□□□ 0.93
TRIM54-202ENST00000380075 CLHC1Q8NHS4 586 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 APIPQ96GX9 242 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 ZCCHC2Q9C0B9 1178 aaKnown RBP20.87■□□□□ 0.93
TRIM54-202ENST00000380075 MAGIXQ9H6Y5 334 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 ADGRE2Q9UHX3 823 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 PCDHB14Q9Y5E9 798 aa20.87■□□□□ 0.93
TRIM54-202ENST00000380075 H0YAE9 185 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 PLOD2O00469 737 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 CXCR6O00574 342 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 SRSF11Q05519 484 aaKnown RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 MTAPQ13126 283 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 GRHL2Q6ISB3 625 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 NOXRED1Q6NXP6 359 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 ZNF765Q7L2R6 523 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 SLC22A15Q8IZD6 547 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 FBXO15Q8NCQ5 510 aaPredicted RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 DTD2Q96FN9 168 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 COQ10AQ96MF6 247 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 TSSK3Q96PN8 268 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 PTTG2Q9NZH5 202 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 MAPRE3Q9UPY8 281 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 MYOCOSA0A1B0GUC4 107 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 EME2A4GXA9 379 aaPredicted RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 H0YIV9 168 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 OR6B1O95007 311 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 BMP10O95393 424 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 HPRP00739 348 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 HOXB9P17482 250 aaPredicted RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 TRPC1P48995 793 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 CTSCP53634 463 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 PNLIPRP1P54315 467 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 C21orf58P58505 322 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 PHC1P78364 1004 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 ELP6Q0PNE2 266 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 ABRQ12979 859 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 BCL7AQ4VC05 210 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 XKR6Q5GH73 641 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 TTC33Q6PID6 262 aaPredicted RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 AGTRAPQ6RW13 159 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 PATL1Q86TB9 770 aaKnown RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 NLRP8Q86W28 1048 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 TMIEQ8NEW7 156 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 WDR20Q8TBZ3 569 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 FAM162AQ96A26 154 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 FAM120BQ96EK7 910 aaKnown RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 APOLD1Q96LR9 279 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 RDH12Q96NR8 316 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 YTHDF1Q9BYJ9 559 aaKnown RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 MTG2Q9H4K7 406 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 IKZF5Q9H5V7 419 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 BRF2Q9HAW0 419 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 SPATA6Q9NWH7 488 aaPredicted RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 GPRC5BQ9NZH0 403 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 STOX2Q9P2F5 926 aaPredicted RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 VPS29Q9UBQ0 182 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 RUVBL1Q9Y265 456 aaKnown RBP20.86■□□□□ 0.93
TRIM54-202ENST00000380075 FADS3Q9Y5Q0 445 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 V9GYQ6 96 aa20.86■□□□□ 0.93
TRIM54-202ENST00000380075 TRIM64CA6NLI5 447 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 CLGNO14967 610 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 VILLO15195 856 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 ALDH3B2P48448 385 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 ABHD18Q0P651 414 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 CWF19L1Q69YN2 538 aaKnown RBP20.85■□□□□ 0.93
TRIM54-202ENST00000380075 DNAJC14Q6Y2X3 702 aaPredicted RBP20.85■□□□□ 0.93
TRIM54-202ENST00000380075 OR56A3Q8NH54 315 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 MAGEE2Q8TD90 523 aaPredicted RBP20.85■□□□□ 0.93
TRIM54-202ENST00000380075 NELL1Q92832 810 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 NTN4Q9HB63 628 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 DNAJB9Q9UBS3 223 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 A0A087WXM4 84 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 TMEM202A6NGA9 273 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 TRIM64A6NGJ6 449 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 UPK1AO00322 258 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 KPNA3O00505 521 aaPredicted RBP20.85■□□□□ 0.93
TRIM54-202ENST00000380075 ITGB7P26010 798 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 KIR3DL1P43629 444 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 ALDH3A2P51648 485 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 CYBRD1Q53TN4 286 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 ZNF648Q5T619 568 aaPredicted RBP20.85■□□□□ 0.93
TRIM54-202ENST00000380075 THEMIS2Q5TEJ8 643 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 ABRAXAS1Q6UWZ7 409 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 ETFBKMTQ8IXQ9 262 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 CYGBQ8WWM9 190 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 SLC47A1Q96FL8 570 aa20.85■□□□□ 0.93
TRIM54-202ENST00000380075 REXO5Q96IC2 774 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms