RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 DNAJC14Q6Y2X3 702 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 NCCRP1Q6ZVX7 275 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 HTR3DQ70Z44 454 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 ADAMTSL2Q86TH1 951 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 CEP97Q8IW35 865 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 ZBTB2Q8N680 514 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 ARFGAP1Q8N6T3 406 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 OR1N1Q8NGS0 311 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 FBXO27Q8NI29 283 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 FRMD8Q9BZ67 464 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 SLC25A51Q9H1U9 297 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 IL1RL2Q9HB29 575 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 FGF21Q9NSA1 209 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 SIX4Q9UIU6 781 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF229Q9UJW7 825 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 SRPK3Q9UPE1 567 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 SONP18583 2426 aaKnown RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 RNF103-CHMP3A0A140T963 221 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 METTL12A8MUP2 240 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 MATN3O15232 486 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 SRCP12931 536 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 RPL5P46777 297 aaKnown RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 NUDT2P50583 147 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 OR1D5P58170 312 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 MGAT3Q09327 533 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 CTBP1Q13363 440 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 CYP51A1Q16850 503 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 PFKFB4Q16877 469 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 PLK5Q496M5 336 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 RBMS3Q6XE24 437 aaKnown RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 VASH1Q7L8A9 365 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 DHDDSQ86SQ9 333 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 AMIGO1Q86WK6 493 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 HPS6Q86YV9 775 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 RELL1Q8IUW5 271 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 TMEM132CQ8N3T6 1108 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 ZBTB8BQ8NAP8 495 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 TOR1AIP2Q8NFQ8 470 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 EXOSC8Q96B26 276 aaKnown RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF717Q9BY31 904 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 TSPAN10Q9H1Z9 355 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 NMRAL1Q9HBL8 299 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 MKKSQ9NPJ1 570 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 EURLQ9NYK6 297 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 TAAR2Q9P1P5 351 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 BTRCQ9Y297 605 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 MFHAS1Q9Y4C4 1052 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 STYXL1Q9Y6J8 313 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 V9GYQ6 96 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 COL24A1Q17RW2 1714 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 OR52A4PA6NMU1 304 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 CDC7O00311 574 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 PHGDHO43175 533 aaKnown RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 GLRA3O75311 464 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 TRMUO75648 421 aaKnown RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 PIGRP01833 764 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 STT3AP46977 705 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 CLCN2P51788 898 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 EPHA4P54764 986 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 ITGA1P56199 1179 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 BTN3A2P78410 334 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 CHAF1BQ13112 559 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 C1QTNF12Q5T7M4 302 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 TMEM214Q6NUQ4 689 aaKnown RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 BHLHB9Q6PI77 547 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 KLHDC10Q6PID8 442 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 OR52K2Q8NGK3 314 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 CA5BP1Q8WTZ4 195 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 LINC01599Q8WXQ3 324 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 MARK4Q96L34 752 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 KCTD15Q96SI1 283 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 SEMA4BQ9NPR2 832 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-202ENST00000379446 SERINC1Q9NRX5 453 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 THAP1Q9NVV9 213 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF358Q9NW07 568 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 MOCS1Q9NZB8 636 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 C3orf18Q9UK00 162 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 SOX13Q9UN79 622 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 PCDHB1Q9Y5F3 818 aa6.36□□□□□ -1.39
NEDD9-202ENST00000379446 CITO14578 2027 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SLC9B1P1A6NJY1 282 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SLC28A1O00337 649 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 KDELR3O43731 214 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 KLHL2O95198 593 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ACPPP15309 386 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TFE3P19532 575 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 NR4A1P22736 598 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 POU1F1P28069 291 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 RPS3AP61247 264 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ID2Q02363 134 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ILF2Q12905 390 aaKnown RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 OLIG2Q13516 323 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 FLOT2Q14254 428 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 GPRC6AQ5T6X5 926 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 RAET1LQ5VY80 246 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 GPRIN1Q7Z2K8 1008 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 C10orf107Q8IVU9 208 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF100Q8IYN0 542 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CLDN19Q8N6F1 224 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 IL17RCQ8NAC3 791 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms