RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CTSVO60911 334 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 IPO13O94829 963 aaKnown RBP17.99■□□□□ 0.47
SSU72-203ENST00000378725 S100BP04271 92 aaPredicted RBP17.99■□□□□ 0.47
SSU72-203ENST00000378725 GSTA1P08263 222 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 KRT15P19012 456 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 CD82P27701 267 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 ZC3H12BQ5HYM0 836 aaKnown RBP17.99■□□□□ 0.47
SSU72-203ENST00000378725 C17orf64Q86WR6 236 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 PPP1R3BQ86XI6 285 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 MCATQ8IVS2 390 aaKnown RBP17.99■□□□□ 0.47
SSU72-203ENST00000378725 ABHD11Q8NFV4 315 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 FGF11Q92914 225 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 TSNARE1Q96NA8 513 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 MRPL57Q9BQC6 102 aaKnown RBP17.99■□□□□ 0.47
SSU72-203ENST00000378725 CNOT10Q9H9A5 744 aaKnown RBP17.99■□□□□ 0.47
SSU72-203ENST00000378725 FANCEQ9HB96 536 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 CUEDC1Q9NWM3 386 aaPredicted RBP17.99■□□□□ 0.47
SSU72-203ENST00000378725 DCDC2Q9UHG0 476 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 SERTAD3Q9UJW9 196 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 SH2B3Q9UQQ2 575 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 SLC22A14Q9Y267 594 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 KIF26BQ2KJY2 2108 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 TMEM8BA6NDV4 472 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 SUPT3HB4E1H0 165 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.98■□□□□ 0.47
SSU72-203ENST00000378725 H7BY64 318 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 SUPT3HO75486 399 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 STK16O75716 305 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 SBK3P0C264 359 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 GDF5P43026 501 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 SLC18A2Q05940 514 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 ZNF844Q08AG5 666 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 RNF44Q7L0R7 432 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 KDF1Q8NAX2 398 aaPredicted RBP17.98■□□□□ 0.47
SSU72-203ENST00000378725 OR4K1Q8NGD4 311 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 OR1L3Q8NH93 324 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 UBTD2Q8WUN7 234 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 EXT2Q93063 718 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 ZNF285Q96NJ3 590 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 PRAP1Q96NZ9 151 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 CD244Q9BZW8 370 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 MRPL46Q9H2W6 279 aaKnown RBP17.98■□□□□ 0.47
SSU72-203ENST00000378725 WWOXQ9NZC7 414 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 TMEM216Q9P0N5 145 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 XPR1Q9UBH6 696 aa17.98■□□□□ 0.47
SSU72-203ENST00000378725 TMEM150CB9EJG8 249 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 TLX3O43711 291 aaPredicted RBP17.97■□□□□ 0.47
SSU72-203ENST00000378725 NRP2O60462 931 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 SRPX2O60687 465 aaPredicted RBP17.97■□□□□ 0.47
SSU72-203ENST00000378725 WDR47O94967 919 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 HSPA7P48741 367 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 ALDH18A1P54886 795 aaKnown RBP17.97■□□□□ 0.47
SSU72-203ENST00000378725 CSNK1G2P78368 415 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 PWWP2BQ6NUJ5 590 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 LRIG3Q6UXM1 1119 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 TRABD2AQ86V40 505 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 SNIP1Q8TAD8 396 aaKnown RBP17.97■□□□□ 0.47
SSU72-203ENST00000378725 NEIL2Q969S2 332 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 ESAMQ96AP7 390 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 SCYL1Q96KG9 808 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 ZIM3Q96PE6 472 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 TMCO1Q9UM00 188 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 TMEM184BQ9Y519 407 aaPredicted RBP17.97■□□□□ 0.47
SSU72-203ENST00000378725 KCNE2Q9Y6J6 123 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 ADAMTS20P59510 1910 aa17.97■□□□□ 0.47
SSU72-203ENST00000378725 TIAF1O95411 115 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 CDH1P12830 882 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 EZRP15311 586 aaKnown RBP17.96■□□□□ 0.47
SSU72-203ENST00000378725 CRHR1P34998 444 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 ITGA1P56199 1179 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 SETDB1Q15047 1291 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 PFKFB4Q16877 469 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 DEFB110Q30KQ9 67 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 FBXO48Q5FWF7 155 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 SLC5A11Q8WWX8 675 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 OR2A5Q96R48 311 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 ZFYVE21Q9BQ24 234 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 SARGQ9BW04 601 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 CAPS2Q9BXY5 557 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 SPRTNQ9H040 489 aaPredicted RBP17.96■□□□□ 0.47
SSU72-203ENST00000378725 DNAJC11Q9NVH1 559 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 GPRC5BQ9NZH0 403 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 DYRK1BQ9Y463 629 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 ASB1Q9Y576 335 aa17.96■□□□□ 0.47
SSU72-203ENST00000378725 KCNE1BA0A087WTH5 132 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 A0A0J9YVX5 310 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 TK2O00142 265 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 DLGAP3O95886 979 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 CTSBP07858 339 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 GFAPP14136 432 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 ZNF28P17035 718 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 KRT4P19013 534 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 CCT5P48643 541 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 AGTR2P50052 363 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 CCR8P51685 355 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 CDC16Q13042 620 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 PCBP2Q15366 365 aaKnown RBP eCLIP17.95■□□□□ 0.46
SSU72-203ENST00000378725 CATSPEREQ5SY80 951 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 FRMPD2BQ6IN97 320 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 METTL2BQ6P1Q9 378 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms