RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SEMA3AQ14563 771 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 NDUFA9Q16795 377 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CXorf57Q6NSI4 855 aaKnown RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 NANOGP8Q6NSW7 305 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TLDC1Q6P9B6 456 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TMEM220Q6QAJ8 160 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 RPTNQ6XPR3 784 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 PIM3Q86V86 326 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 KBTBD6Q86V97 674 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 NPAS4Q8IUM7 802 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
VPS36-201ENST00000378060 CENPSQ8N2Z9 138 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 SNX33Q8WV41 574 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 TMEM74Q96NL1 305 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CFHR5Q9BXR6 569 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 RETREG1Q9H6L5 497 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 NANOGQ9H9S0 305 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 MEAF6Q9HAF1 191 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 Q9Y3F1 56 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 CPQQ9Y646 472 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 PMF1-BGLAPU3KQ54 211 aa8.18□□□□□ -1.1
VPS36-201ENST00000378060 PRSS51A0A1B0GVH4 220 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ABHD14A-ACY1A0A1B0GW23 586 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 DUXAA6NLW8 204 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 MANBAO00462 879 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 RASAL1O95294 804 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 KHKP50053 298 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 PITPNAQ00169 270 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 NIPAL4Q0D2K0 466 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 GALNT1Q10472 559 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 CRB2Q5IJ48 1285 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 C6orf141Q5SZD1 244 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ATG9BQ674R7 924 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 MBOAT1Q6ZNC8 495 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 CHST9Q7L1S5 443 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 OSTM1Q86WC4 334 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SUN5Q8TC36 379 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ITFG2Q969R8 447 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 FBXL20Q96IG2 436 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 C1orf74Q96LT6 269 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 RNF39Q9H2S5 420 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 LIN28AQ9H9Z2 209 aaKnown RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 EQTNQ9NQ60 294 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 TMEM248Q9NWD8 314 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SPIN1Q9Y657 262 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 SEPT4O43236 478 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 PRMT3O60678 531 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 T-ENOLP0DO92 83 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ITIH1P19827 911 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 GLDCP23378 1020 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 XKP51811 444 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ZNF45Q02386 682 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 RIPPLY1Q0D2K3 151 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 TGFBIQ15582 683 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ZNF630Q2M218 657 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 SPRED3Q2MJR0 410 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SPANXN4Q5MJ08 99 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ATXN7L2Q5T6C5 722 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 OR4F3Q6IEY1 312 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 KLHL35Q6PF15 583 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 PAMR1Q6UXH9 720 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 GOLGA7Q7Z5G4 137 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 FBXO22Q8NEZ5 403 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 PJA1Q8NG27 643 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 CEP295NLQ96MC4 621 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 PCYT2Q99447 389 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 GSDMCQ9BYG8 508 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SUV39H2Q9H5I1 410 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 MARCH7Q9H992 704 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SAGE1Q9NXZ1 904 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 CKLFQ9UBR5 152 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ASB3Q9Y575 518 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 A0A0U1RQF3 1178 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ISPDA4D126 451 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 FAM172BPA6NC97 362 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 AKAP8O43823 692 aaKnown RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 SERPINA3P01011 423 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 INHAP05111 366 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SLC35E2BP0CK96 405 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 CMPK1P30085 196 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 RABGGTBP53611 331 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 DSTNP60981 165 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 STXBP1P61764 594 aaKnown RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 SCAPQ12770 1279 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 HSPB3Q12988 150 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 MEP1AQ16819 746 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 MYLK3Q32MK0 819 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 TPGS2Q68CL5 300 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 B3GNT9Q6UX72 402 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 SLC15A3Q8IY34 581 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SIX5Q8N196 739 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 ZNF433Q8N7K0 673 aaPredicted RBP8.17□□□□□ -1.1
VPS36-201ENST00000378060 TTLQ8NG68 377 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 OR4C6Q8NH72 309 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 FNDC8Q8TC99 324 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 SLC9A6Q92581 669 aa8.17□□□□□ -1.1
VPS36-201ENST00000378060 CMTM7Q96FZ5 175 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms