RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PARP9Q8IXQ6 854 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 SLC34A3Q8N130 599 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 CSNK1A1LQ8N752 337 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 BCORP1Q8N888 145 aa14.07□□□□□ -0.16
HDAC6-204ENST00000376643 FBXO15Q8NCQ5 510 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-204ENST00000376643 NAP1L3Q99457 506 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-204ENST00000376643 MKKSQ9NPJ1 570 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-204ENST00000376643 NUP210LQ5VU65 1888 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 SPENQ96T58 3664 aaKnown RBP14.06□□□□□ -0.16
HDAC6-204ENST00000376643 TRAV17A0A0B4J275 112 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 FAM237BA0A1B0GVD1 139 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 A1L4Q6 167 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 CTAGE9A4FU28 777 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 EIF3FO00303 357 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-204ENST00000376643 CEP104O60308 925 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 NIPSNAP2O75323 286 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 ARNTP27540 789 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 MAGEA6P43360 314 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 PNLIPRP1P54315 467 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 EMP2P54851 167 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 ARG2P78540 354 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 PRDX1Q06830 199 aaKnown RBP14.06□□□□□ -0.16
HDAC6-204ENST00000376643 TSTA3Q13630 321 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-204ENST00000376643 SIX1Q15475 284 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-204ENST00000376643 HIF1AQ16665 826 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 KLHL38Q2WGJ6 581 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 FRMPD2BQ6IN97 320 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 NEPROQ6NW34 567 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 CILP2Q8IUL8 1156 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 METTL27Q8N6F8 245 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-204ENST00000376643 MCOLN3Q8TDD5 553 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 FAR1Q8WVX9 515 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-204ENST00000376643 KCNJ9Q92806 393 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 INPP5DQ92835 1189 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 YIPF2Q9BWQ6 316 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 FAM129AQ9BZQ8 928 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 TRPC4Q9UBN4 977 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 TEKT2Q9UIF3 430 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 CRYL1Q9Y2S2 319 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 DOPEY1Q5JWR5 2465 aa14.06□□□□□ -0.16
HDAC6-204ENST00000376643 NOTCH2Q04721 2471 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 A0A1B0GUH1 482 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 A0A1W2PPV9 198 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 A0A1W2PQ72 361 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 SDR42E2A6NKP2 422 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ARHGEF33A8MVX0 844 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 H0YGG7 62 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ZBTB14O43829 449 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 BMP10O95393 424 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 SERPINA7P05543 415 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 HEXBP07686 556 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 MPC1LP0DKB6 136 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 AVPR1BP47901 424 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ARF3P61204 181 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-204ENST00000376643 DHX34Q14147 1143 aaKnown RBP14.05□□□□□ -0.16
HDAC6-204ENST00000376643 FAM53BQ14153 422 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 CCSMST1Q4G0I0 132 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ICE2Q659A1 982 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ATG9BQ674R7 924 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ZNF470Q6ECI4 717 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 SHISA6Q6ZSJ9 500 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 KCNMB4Q86W47 210 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 SUN3Q8TAQ9 357 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 GRHL3Q8TE85 626 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ACAT2Q9BWD1 397 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 TGIF2Q9GZN2 237 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 DRC3Q9H069 523 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 PCBD2Q9H0N5 130 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ZBTB20Q9HC78 741 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-204ENST00000376643 ZNF160Q9HCG1 818 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 LZTFL1Q9NQ48 299 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 OLAHQ9NV23 265 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 TAC3Q9UHF0 121 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 RUVBL2Q9Y230 463 aaKnown RBP14.05□□□□□ -0.16
HDAC6-204ENST00000376643 MRPS2Q9Y399 296 aaKnown RBP14.05□□□□□ -0.16
HDAC6-204ENST00000376643 PCSK5Q92824 1860 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 HIVEP3Q5T1R4 2406 aa14.05□□□□□ -0.16
HDAC6-204ENST00000376643 SNRNP200O75643 2136 aaKnown RBP14.05□□□□□ -0.16
HDAC6-204ENST00000376643 LOC105369274A0A096LPK9 316 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 LOC102723532A0A0G2JNH3 316 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 ENO4A6NNW6 628 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 IDSB3KWA1 339 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 WFS1O76024 890 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 FOXL2P58012 376 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 GPS1Q13098 491 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 FASTKQ14296 549 aaKnown RBP14.04□□□□□ -0.16
HDAC6-204ENST00000376643 KCNJ11Q14654 390 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 LONRF1Q17RB8 773 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 ACSBG2Q5FVE4 666 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.04□□□□□ -0.16
HDAC6-204ENST00000376643 THEMIS2Q5TEJ8 643 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 UGT3A1Q6NUS8 523 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 FBXO42Q6P3S6 717 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 LINC00696Q6ZRV3 163 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 ADCK2Q7Z695 626 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 PAQR7Q86WK9 346 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 OR4N4Q8N0Y3 316 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 MCUQ8NE86 351 aa14.04□□□□□ -0.16
HDAC6-204ENST00000376643 METTL21AQ8WXB1 218 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms