RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	UROS	P10746	265 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	TAS2R50	P59544	299 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ERVPABLB-1	P60509	514 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	KPNB1	Q14974	876 aa	Known RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	CYP27C1	Q4G0S4	372 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	TTLL10	Q6ZVT0	673 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	OR52E1	Q8NGJ3	308 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	MMAB	Q96EY8	250 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ARRDC1-AS1	Q9H2J1	176 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	TAAR2	Q9P1P5	351 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	HCN3	Q9P1Z3	774 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	EMCN	Q9ULC0	261 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	TPST2	O60704	377 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	GSTM1	P09488	218 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	LINC00271	P0C7V0	271 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	CALB2	P22676	271 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	TLX1	P31314	330 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	CCR8	P51685	355 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	GPAT3	Q53EU6	434 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	CPTP	Q5TA50	214 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	HLA-DQA1	Q5Y7H0	255 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ADNP2	Q6IQ32	1131 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	SFRP1	Q8N474	314 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	RBM15B	Q8NDT2	890 aa	Known RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	RDH11	Q8TC12	318 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	EME1	Q96AY2	570 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	RMND5A	Q9H871	391 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	DDX18	Q9NVP1	670 aa	Known RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	EHD3	Q9NZN3	535 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	LRIT1	Q9P2V4	623 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ROS1	P08922	2347 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ZNF646	O15015	1829 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	MYCLP1	P12525	358 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	C16orf89	Q6UX73	402 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ZNF438	Q7Z4V0	828 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ATP6V1C2	Q8NEY4	427 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	GPR150	Q8NGU9	434 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ZNF480	Q8WV37	535 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	EDA	Q92838	391 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	EGLN2	Q96KS0	407 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	TMEM74	Q96NL1	305 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	CAMK1G	Q96NX5	476 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	RANBP9	Q96S59	729 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	CTRC	Q99895	268 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	CCDC90B	Q9GZT6	254 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	S1PR5	Q9H228	398 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	VCX	Q9H320	206 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	ALG2	Q9H553	416 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	MRM3	Q9HC36	420 aa	Known RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	PNO1	Q9NRX1	252 aa	Known RBP	13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	OBP2A	Q9NY56	170 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	MARK1	Q9P0L2	795 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	PRKAG3	Q9UGI9	489 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	GNB5	O14775	395 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	TCEA3	O75764	348 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	PDYN	P01213	254 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	CPN2	P22792	545 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	KIAA0895L	Q68EN5	471 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC40A1	Q9NP59	571 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	VPS29	Q9UBQ0	182 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	IKZF3	Q9UKT9	509 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	WDR81	Q562E7	1941 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SCN3A	Q9NY46	2000 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC9B1P1	A6NJY1	282 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	VEGFD	O43915	354 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	FCAR	P24071	287 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	MAGEA6	P43360	314 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	KIR3DL1	P43629	444 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	CCR3	P51677	355 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SIM1	P81133	766 aa	Predicted RBP	13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	TOR1AIP1	Q5JTV8	583 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SPANXN4	Q5MJ08	99 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	BNIPL	Q7Z465	357 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	PCDHAC1	Q9H158	963 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	RETREG1	Q9H6L5	497 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	ITM2C	Q9NQX7	267 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	KIF17	Q9P2E2	1029 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SH3GLB1	Q9Y371	365 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568		G3V2L1	256 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	NUAK1	O60285	661 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	HK3	P52790	923 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	PSME3	P61289	254 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SMAD2	Q15796	467 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC2A7	Q6PXP3	512 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	AMIGO2	Q86SJ2	522 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	OR4A15	Q8NGL6	344 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	C1orf109	Q9NX04	203 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	PSME2	Q9UL46	239 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	DLGAP4	Q9Y2H0	992 aa		13.09	□□□□□ -0.31
DDR1-225	ENST00000376568	MDC1	Q14676	2089 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	DNAJA2	O60884	412 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	ZNF821	O75541	412 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	ATP5H	O75947	161 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	OPN1SW	P03999	348 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	ZNF23	P17027	643 aa		13.08	□□□□□ -0.32
DDR1-225	ENST00000376568	RABIF	P47224	123 aa		13.08	□□□□□ -0.32

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