RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RPA4Q13156 261 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 GTDC1Q4AE62 458 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 FBXO43Q4G163 708 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 CAPRIN2Q6IMN6 1127 aaKnown RBP12.16□□□□□ -0.46
CLCN6-206ENST00000376496 SLC30A9Q6PML9 568 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 SPATA24Q86W54 205 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 SFTPA2Q8IWL1 248 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 SLC5A11Q8WWX8 675 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 SH3KBP1Q96B97 665 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 TOE1Q96GM8 510 aaKnown RBP12.16□□□□□ -0.46
CLCN6-206ENST00000376496 TMEM168Q9H0V1 697 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 OR51B5Q9H339 312 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 SLC6A13Q9NSD5 602 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 SCML1Q9UN30 329 aa12.16□□□□□ -0.46
CLCN6-206ENST00000376496 FEZF1A0PJY2 475 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 FPGTO14772 594 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 MTPNP58546 118 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 PGS1Q32NB8 556 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 NOXRED1Q6NXP6 359 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 GCNT7Q6ZNI0 430 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 C1orf52Q8N6N3 182 aaKnown RBP12.15□□□□□ -0.46
CLCN6-206ENST00000376496 OR2T34Q8NGX1 318 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 ROPN1LQ96C74 230 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 MENTQ9BUN1 341 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 GPR174Q9BXC1 333 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 TRIT1Q9H3H1 467 aaKnown RBP12.15□□□□□ -0.46
CLCN6-206ENST00000376496 ITM2CQ9NQX7 267 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 STX18Q9P2W9 335 aaKnown RBP12.15□□□□□ -0.46
CLCN6-206ENST00000376496 TBC1D29Q9UFV1 150 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 CD300AQ9UGN4 299 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 LEF1Q9UJU2 399 aaPredicted RBP12.15□□□□□ -0.46
CLCN6-206ENST00000376496 PIPSLA2A3N6 862 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 KRBA1A5PL33 1030 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 H3BNX3 289 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 RASGRP1O95267 797 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 GSNP06396 782 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 C1GALT1C1LP0DN25 315 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 JAK1P23458 1154 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 MAPK9P45984 424 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 GRIK2Q13002 908 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 KRT33BQ14525 404 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 DHDDSQ86SQ9 333 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 SNX19Q92543 992 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 CMTM7Q96FZ5 175 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 SORBS1Q9BX66 1292 aaKnown RBP12.15□□□□□ -0.46
CLCN6-206ENST00000376496 VPS29Q9UBQ0 182 aa12.15□□□□□ -0.46
CLCN6-206ENST00000376496 LRRC72A6NJI9 287 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 H0YIV9 168 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 DFNA5O60443 496 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 LMNAP02545 664 aaKnown RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 NCK1P16333 377 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 HNRNPA2B1P22626 353 aaKnown RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 HNF4AP41235 474 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 AP2B1P63010 937 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 CTBSQ01459 385 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 NANOGP8Q6NSW7 305 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 MED27Q6P2C8 311 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 NXPE4Q6UWF7 544 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 ZNF852Q6ZMS4 543 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 OR13H1Q8NG92 308 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 MAGEC3Q8TD91 643 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 TMEM125Q96AQ2 219 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 GUCD1Q96NT3 240 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 TCEAL2Q9H3H9 227 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 NANOGQ9H9S0 305 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 KLHL20Q9Y2M5 609 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 TDRD6O60522 2096 aaKnown RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 SNRNP200O75643 2136 aaKnown RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 H7BY64 318 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 IGHV4-34P06331 123 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 IDSP22304 550 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 TEAD1P28347 426 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 MRPL19P49406 292 aaKnown RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 TRIM25Q14258 630 aaKnown RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 LPCAT4Q643R3 524 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 DLEU7Q6UYE1 221 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 HACD2Q6Y1H2 254 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 LRRC74BQ6ZQY2 392 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 HID1Q8IV36 788 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 KLHDC8AQ8IYD2 350 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 OR7A2PQ8NGA2 310 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 SLC13A3Q8WWT9 602 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 AURKBQ96GD4 344 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 CAMK1GQ96NX5 476 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 PRAP1Q96NZ9 151 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 OR2M4Q96R27 311 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 ZBTB18Q99592 522 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 SLC2A4RGQ9NR83 387 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 SPATA6Q9NWH7 488 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 GID8Q9NWU2 228 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 ACSL5Q9ULC5 683 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 DNMT3AQ9Y6K1 912 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 ARHGEF17Q96PE2 2063 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 LAMA1P25391 3075 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 A0A1W2PPV9 198 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 UGDHO60701 494 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 BCAS2O75934 225 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 PGRP06401 933 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 MTHFD1P11586 935 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms