RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 PLXNA4Q9HCM2 1894 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 FAM220BPB1ANY3 271 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 IFRD1O00458 451 aaPredicted RBP11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 PBLDP30039 288 aaPredicted RBP11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 OR1E1P30953 314 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 PTGS2P35354 604 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 PBX3P40426 434 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 MAGEA2P43356 314 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 PPP3CCP48454 512 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 CRYBB1P53674 252 aaPredicted RBP11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 CDC42EP1Q00587 391 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 IL10RBQ08334 325 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 LRRC74AQ0VAA2 488 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 PCBP1Q15365 356 aaKnown RBP eCLIP11.18□□□□□ -0.622e-12■■■□□ 14.9
TM9SF2-201ENST00000376387 TIGD6Q17RP2 521 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 AFTPHQ6ULP2 937 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 SBSNQ6UWP8 590 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 AGMOQ6ZNB7 445 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 RGL4Q8IZJ4 473 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 ATG16L2Q8NAA4 619 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 OR52E4Q8NGH9 312 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 CDCA5Q96FF9 252 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 KCNC2Q96PR1 638 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 COPS4Q9BT78 406 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 GABARAPL1Q9H0R8 117 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 KRT84Q9NSB2 600 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 TMEM45AQ9NWC5 275 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 ADPRHL2Q9NX46 363 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 TAS2R16Q9NYV7 291 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 DLGAP4Q9Y2H0 992 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 PCDHGB6Q9Y5F9 930 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 E5RI56 91 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 TLL1O43897 1013 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 LRATO95237 230 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 SERPINF2P08697 491 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 EPB42P16452 691 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 CA5AP35218 305 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 BEX3Q00994 111 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 DOC2BQ14184 412 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 IRF3Q14653 427 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 PARP15Q460N3 678 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 DOK6Q6PKX4 331 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 EFHBQ8N7U6 833 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 SERPINB11Q96P15 392 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 RPRD1AQ96P16 312 aaPredicted RBP11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 TLR6Q9Y2C9 796 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 UPK3BL1B0FP48 263 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 UPK3BL2E5RIL1 263 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 M0R129 80 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 CXCL11O14625 94 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 ODC1P11926 461 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 BMP1P13497 986 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 EFNA1P20827 205 aaPredicted RBP11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 PTPN6P29350 595 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 CTSKP43235 329 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 CLCN7P51798 805 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 BCL7AQ4VC05 210 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 AGAP6Q5VW22 663 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 FKBP9P1Q75LS8 142 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 TCAIMQ8N3R3 496 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 NATD1Q8N6N6 113 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 AGAP4Q96P64 663 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 CHCHD6Q9BRQ6 235 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 SERHL2Q9H4I8 314 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 DDX28Q9NUL7 540 aaKnown RBP11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 EHD3Q9NZN3 535 aa11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 ZNF490Q9ULM2 529 aaPredicted RBP11.18□□□□□ -0.62
TM9SF2-201ENST00000376387 LOC105371267A0A1B0GV96 52 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 SAGE2PA6NJ88 616 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 KRT8P05787 483 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 BCKDHAP12694 445 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 TACR1P25103 407 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 GJA5P36382 358 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 UGT2B10P36537 528 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 OR2B6P58173 313 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 ATG9BQ674R7 924 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 MBOAT1Q6ZNC8 495 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 DNAJB7Q7Z6W7 309 aaPredicted RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 TSPYL5Q86VY4 417 aaPredicted RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 GPC2Q8N158 579 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 DNAJB8Q8NHS0 232 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 PEX13Q92968 403 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 PPP3R2Q96LZ3 170 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 KCNS3Q9BQ31 491 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 DPH2Q9BQC3 489 aaPredicted RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 IL1RAPQ9NPH3 570 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 ABI2Q9NYB9 513 aaPredicted RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 KIF17Q9P2E2 1029 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 SATB2Q9UPW6 733 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 SAMHD1Q9Y3Z3 626 aaKnown RBP11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 PCDHGC4Q9Y5F7 938 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 PCDHGA6Q9Y5G7 932 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 CTDSP2O14595 271 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 FFAR2O15552 330 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 PRAMEF11O60813 436 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 PRLP01236 227 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 IL6P05231 212 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 NPRL3Q12980 569 aa11.17□□□□□ -0.62
TM9SF2-201ENST00000376387 PCBP2Q15366 365 aaKnown RBP eCLIP11.17□□□□□ -0.621e-30■■■■□ 25.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms