RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ZBED3Q96IU2 234 aaPredicted RBP16.36■□□□□ 0.21
VARS-215ENST00000375663 PKP4Q99569 1192 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 SLITRK2Q9H156 845 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 CTPS2Q9NRF8 586 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 COL22A1Q8NFW1 1626 aaPredicted RBP16.36■□□□□ 0.21
VARS-215ENST00000375663 TBC1D3BA6NDS4 549 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 SLC9A3R1O14745 358 aaPredicted RBP16.36■□□□□ 0.21
VARS-215ENST00000375663 GGT1P19440 569 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 STAT5AP42229 794 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 PNLIPRP1P54315 467 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 PON2Q15165 354 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 SERPINA13PQ6UXR4 307 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 FAM20CQ8IXL6 584 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 OR5AK3PQ8NH89 298 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 C2orf15Q8WU43 125 aaKnown RBP16.36■□□□□ 0.21
VARS-215ENST00000375663 ANKHQ9HCJ1 492 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 NKIRAS2Q9NYR9 191 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 SPIN1Q9Y657 262 aaPredicted RBP16.36■□□□□ 0.21
VARS-215ENST00000375663 ITGB1P05556 798 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 CARM1Q86X55 608 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 SLC43A3Q8NBI5 491 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 RASSF5Q8WWW0 418 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 TREX1Q9NSU2 369 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 MAP10Q9P2G4 905 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 ATE1O95260 518 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 SELPP16109 830 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 KDELR2P33947 212 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 GRIA2P42262 883 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 RPP38P78345 283 aaKnown RBP16.36■□□□□ 0.21
VARS-215ENST00000375663 TUBB3Q13509 450 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 FOXB2Q5VYV0 432 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 CNTN4Q8IWV2 1026 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 ZMIZ2Q8NF64 920 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 GEMIN6Q8WXD5 167 aaKnown RBP16.36■□□□□ 0.21
VARS-215ENST00000375663 CMTM7Q96FZ5 175 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 TBC1D17Q9HA65 648 aa16.36■□□□□ 0.21
VARS-215ENST00000375663 A0A096LPI6 279 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 ACOT8O14734 319 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 TGFB1P01137 390 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 ERVPABLB-1P60509 514 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 FCHO2Q0JRZ9 810 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 HEPACAMQ14CZ8 416 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 CYBRD1Q53TN4 286 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 KDELC1Q6UW63 502 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 GRPEL2Q8TAA5 225 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 TMEM203Q969S6 136 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 MIR1-1HGQ9H1L0 117 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 SUV39H2Q9H5I1 410 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 MAN2B2Q9Y2E5 1009 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 BCAS1O75363 584 aaPredicted RBP16.35■□□□□ 0.21
VARS-215ENST00000375663 FUT4P22083 530 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 OPRL1P41146 370 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 CDK6Q00534 326 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 VMACQ2NL98 169 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 PLA2G4EQ3MJ16 856 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 SLC36A3Q495N2 470 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 SH2D5Q6ZV89 423 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 ZNF598Q86UK7 904 aaKnown RBP16.35■□□□□ 0.21
VARS-215ENST00000375663 RETREG3Q86VR2 466 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 PHYKPLQ8IUZ5 450 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 ARHGAP12Q8IWW6 846 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 CLEC4AQ9UMR7 237 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 TRBC2A0A5B9 178 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 ARSAP15289 507 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 TLX1P31314 330 aaPredicted RBP16.35■□□□□ 0.21
VARS-215ENST00000375663 MAGEA8P43361 318 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 GABARAPL2P60520 117 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 SEMA3AQ14563 771 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 CBX2Q14781 532 aaPredicted RBP16.35■□□□□ 0.21
VARS-215ENST00000375663 CLCA4Q14CN2 919 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 NDUFAF6Q330K2 333 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 CXorf57Q6NSI4 855 aaKnown RBP16.35■□□□□ 0.21
VARS-215ENST00000375663 KLHL6Q8WZ60 621 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 C3orf14Q9HBI5 128 aa16.35■□□□□ 0.21
VARS-215ENST00000375663 CHST10O43529 356 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 NCS1P62166 190 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 RCAN2Q14206 197 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 ANKRD26P1Q6NSI1 321 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 ZNF517Q6ZMY9 492 aaPredicted RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 OXR1Q8N573 874 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 FRS2Q8WU20 508 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 SLC30A2Q9BRI3 323 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 SLC22A4Q9H015 551 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 TMLHEQ9NVH6 421 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 GMPR2Q9P2T1 348 aaKnown RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 DNAJC25-GNG10A0A024R161 153 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 ALDOCP09972 364 aaKnown RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 PRDX3P30048 256 aaKnown RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 TCEA2Q15560 299 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 KCTD11Q693B1 232 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 PIWIL3Q7Z3Z3 882 aaKnown RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 FCRL4Q96PJ5 515 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 WRAP53Q9BUR4 548 aaKnown RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 OLAHQ9NV23 265 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 ITIH1P19827 911 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 CSTF2P33240 577 aaKnown RBP eCLIP16.34■□□□□ 0.21
VARS-215ENST00000375663 XKP51811 444 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 RGS8P57771 180 aaPredicted RBP16.34■□□□□ 0.21
VARS-215ENST00000375663 GPR17Q13304 367 aa16.34■□□□□ 0.21
VARS-215ENST00000375663 RNASE12Q5GAN4 147 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms