RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 LAPTM5Q13571 262 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 PAGE2BQ5JRK9 111 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 TCHHL1Q5QJ38 904 aaPredicted RBP16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 FAM219BQ5XKK7 198 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 OOSP2Q86WS3 158 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 FAM129CQ86XR2 697 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 LAS2Q8IYD9 372 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 ACTRT2Q8TDY3 377 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 EBF4Q9BQW3 602 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 CCDC28BQ9BUN5 200 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 SLC6A20Q9NP91 592 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 PFDN4Q9NQP4 134 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 GEMIN8Q9NWZ8 242 aaKnown RBP16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 ACTR10Q9NZ32 417 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 SNX6Q9UNH7 406 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 APOBEC2Q9Y235 224 aaKnown RBP16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 FIS1Q9Y3D6 152 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 TIMM22Q9Y584 194 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 PCDHGB2Q9Y5G2 931 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 SDK1Q7Z5N4 2213 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 WDFY4Q6ZS81 3184 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 VPS13AQ96RL7 3174 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 IGKV1-8A0A0C4DH67 115 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 PIPSLA2A3N6 862 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 OR6C74A6NCV1 312 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 TRIM38O00635 465 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 SKAP2O75563 359 aaPredicted RBP16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 GLB1P16278 677 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 VARSP26640 1264 aaKnown RBP16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 SERPINB3P29508 390 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 CMPK1P30085 196 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 CCR8P51685 355 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 SLBPQ14493 270 aaKnown RBP eCLIP16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 ZRSR2Q15696 482 aaKnown RBP16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 SLC5A12Q1EHB4 618 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 SLC9B1Q4ZJI4 515 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 CATSPEREQ5SY80 951 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 VWA5B1Q5TIE3 1220 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 FRG2Q64ET8 278 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 ZNF425Q6IV72 752 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 KLHL35Q6PF15 583 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 TRIM46Q7Z4K8 759 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 GATAD2AQ86YP4 633 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 WDR20Q8TBZ3 569 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 UBE2E3Q969T4 207 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 PRR11Q96HE9 360 aaPredicted RBP16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 FRG2BQ96QU4 278 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 OR2A14Q96R47 310 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 ACAT2Q9BWD1 397 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 TBC1D10AQ9BXI6 508 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 EPB41L1Q9H4G0 881 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 NT5DC2Q9H857 520 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 ABCF3Q9NUQ8 709 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 CUEDC1Q9NWM3 386 aaPredicted RBP16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 ANKMY1Q9P2S6 941 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 POMT2Q9UKY4 750 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 RNF215Q9Y6U7 377 aa16.58■□□□□ 0.24
HLA-DMA-201ENST00000374843 LY6G6EA0A0G2JKS1 128 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 C2orf74A8MZ97 194 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 NPIPB8E9PQR5 432 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 DIAPH2O60879 1101 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 VPS4BO75351 444 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 UBXN7O94888 489 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 PRR35P0CG20 571 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 UGT2B7P16662 529 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 GPR3P46089 330 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 NAA25Q14CX7 972 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 CPSF6Q16630 551 aaKnown RBP eCLIP16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 TCEAL6Q6IPX3 200 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 MED27Q6P2C8 311 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 ZNF761Q86XN6 746 aaPredicted RBP16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 MYLK4Q86YV6 388 aaPredicted RBP16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 MINDY1Q8N5J2 469 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 OR6C4Q8NGE1 309 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 RSC1A1Q92681 617 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 TCEAL3Q969E4 200 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 REPS1Q96D71 796 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 SLC38A3Q99624 504 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 AIF1LQ9BQI0 150 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 SARGQ9BW04 601 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 IRF2BPLQ9H1B7 796 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 SPNS1Q9H2V7 528 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 SMOC1Q9H4F8 434 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 ELOVL6Q9H5J4 265 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 MRPS30Q9NP92 439 aaKnown RBP16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 TCF7L2Q9NQB0 619 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 DNAAF2Q9NVR5 837 aaKnown RBP16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 GMEB2Q9UKD1 530 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 PPT2Q9UMR5 302 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 BTRCQ9Y297 605 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 CCL27Q9Y4X3 112 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 PCDHGA11Q9Y5H2 935 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 U3KQA8 63 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 USP34Q70CQ2 3546 aa16.57■□□□□ 0.24
HLA-DMA-201ENST00000374843 LNP1A1A4G5 178 aa16.56■□□□□ 0.24
HLA-DMA-201ENST00000374843 RHPN2P1A8MT19 583 aa16.56■□□□□ 0.24
HLA-DMA-201ENST00000374843 ISM1B1AKI9 464 aa16.56■□□□□ 0.24
HLA-DMA-201ENST00000374843 FFAR3O14843 346 aa16.56■□□□□ 0.24
HLA-DMA-201ENST00000374843 GPR42O15529 346 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms