RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 HIC2Q96JB3 615 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 GORASP2Q9H8Y8 452 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 DEC1Q9P2X7 70 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 PCDHGA11Q9Y5H2 935 aa15.47■□□□□ 0.07
CNKSR1-202ENST00000374253 A0A096LPI6 279 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 H0Y858 1186 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 ZNF682O95780 498 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 PCSK6P29122 969 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 CAPGP40121 348 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 NRIP1P48552 1158 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 ARSFP54793 590 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 ACSM2AQ08AH3 577 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 SPIDRQ14159 915 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 NFE2L1Q14494 772 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 ZNF234Q14588 700 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 RBBP5Q15291 538 aaKnown RBP15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 GAB4Q2WGN9 574 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 ACSM2BQ68CK6 577 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 CES5AQ6NT32 575 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 PSRC1Q6PGN9 363 aaPredicted RBP15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 NEK10Q6ZWH5 1172 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 NPAS3Q8IXF0 933 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 ETFBKMTQ8IXQ9 262 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 HUS1BQ8NHY5 278 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 ZNF480Q8WV37 535 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 GLMNQ92990 594 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 SH3KBP1Q96B97 665 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 NUS1Q96E22 293 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 CCDC138Q96M89 665 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 COQ10AQ96MF6 247 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 CCDC115Q96NT0 180 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 IL17FQ96PD4 163 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 VPS35Q96QK1 796 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 RMND5AQ9H871 391 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 THG1LQ9NWX6 298 aaKnown RBP15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 ATXN10Q9UBB4 475 aa15.46■□□□□ 0.07
CNKSR1-202ENST00000374253 FPGTO14772 594 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 ERN1O75460 977 aaKnown RBP15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 TBPL1P62380 186 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 IER5LQ5T953 404 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 LIPJQ5W064 366 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 PDE12Q6L8Q7 609 aaKnown RBP15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 ZCCHC8Q6NZY4 707 aaKnown RBP15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 SPESP1Q6UW49 350 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 TMEM179BQ7Z7N9 219 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 PLA2G15Q8NCC3 412 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 FGF13Q92913 245 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 FOPNLQ96NB1 174 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 MUS81Q96NY9 551 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 SH3GL1Q99961 368 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 UGT2B28Q9BY64 529 aa15.46■□□□□ 0.06
CNKSR1-202ENST00000374253 NUMA1Q14980 2115 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 USP34Q70CQ2 3546 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 TBC1D3BA6NDS4 549 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 DIRAS1O95057 198 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 PRNPP04156 253 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ADRB3P13945 408 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ELK4P28324 431 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 MAPK1P28482 360 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 GZMMP51124 257 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 RPS13P62277 151 aaKnown RBP15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 VAC14Q08AM6 782 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 HNRNPA1L2Q32P51 320 aaKnown RBP15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 LRIF1Q5T3J3 769 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 RASGRP3Q8IV61 690 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ZNF547Q8IVP9 402 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 OR7G3Q8NG95 312 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 HAUS8Q9BT25 410 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ACAT2Q9BWD1 397 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 CFAP20Q9Y6A4 193 aaKnown RBP15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 G3V2T6 193 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 HOXC11O43248 304 aaPredicted RBP15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 C1orf105O95561 183 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ALBP02768 609 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ASLP04424 464 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ABCB1P08183 1280 aaPredicted RBP15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ENGP17813 658 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 LBX1P52954 281 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 WNT3P56703 355 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 CWF19L1Q69YN2 538 aaKnown RBP15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 TTC23LQ6PF05 361 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 OR8D1Q8WZ84 308 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 HERVK_113Q902F9 699 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 NCSTNQ92542 709 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 TESCQ96BS2 214 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 LRIG1Q96JA1 1093 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 FAM129BQ96TA1 746 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 IGFLR1Q9H665 355 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 ZNF639Q9UID6 485 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 MAN2B2Q9Y2E5 1009 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 HEMK1Q9Y5R4 338 aaPredicted RBP15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 CEPT1Q9Y6K0 416 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 COMMD3-BMI1R4GMX3 469 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 PCM1Q15154 2024 aa15.45■□□□□ 0.06
CNKSR1-202ENST00000374253 GNG14A0A1W2PPG7 69 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 NTRK1P04629 796 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 ZNF8P17098 575 aaPredicted RBP15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 PRPH2P23942 346 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 SHMT2P34897 504 aa15.44■□□□□ 0.06
CNKSR1-202ENST00000374253 RAE1P78406 368 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms