RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 NCBP2P52298 156 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 LIN52Q52LA3 116 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 SVOPLQ8N434 492 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF611Q8N823 705 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 TMED9Q9BVK6 235 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 GPR88Q9GZN0 384 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 COQ10BQ9H8M1 238 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ANKRA2Q9H9E1 313 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 PLAGL1Q9UM63 463 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ASB3Q9Y575 518 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 SLC35F4A4IF30 521 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 EIF1AYO14602 144 aaKnown RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 WNT9AO14904 365 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 TPSB2P20231 275 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 NPR2P20594 1047 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 BLKP51451 505 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 CCNHP51946 323 aaPredicted RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 TPSAB1Q15661 275 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 SSX6Q7RTT6 188 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 PROKR2Q8NFJ6 384 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 PCDH19Q8TAB3 1148 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 FUBP3Q96I24 572 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 BARD1Q99728 777 aaKnown RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 KAT8Q9H7Z6 458 aaKnown RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 CNTN3Q9P232 1028 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 Q9Y3F1 56 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 NALCNQ8IZF0 1738 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 KERAO60938 352 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 PRAMEF12O95522 483 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 TNFP01375 233 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 SLC2A2P11168 524 aaPredicted RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 TAF1AQ15573 450 aaPredicted RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 HGSNATQ68CP4 663 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 SPAG16Q8N0X2 631 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF676Q8N7Q3 588 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 GRPEL2Q8TAA5 225 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 SLC7A6OSQ96CW6 309 aaPredicted RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 MUC13Q9H3R2 512 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 GDAP2Q9NXN4 497 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 IRAK2O43187 625 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ADGRF1Q5T601 910 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 AKAP1Q92667 903 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 LENG8Q96PV6 779 aaPredicted RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 TUBGCP5Q96RT8 1024 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 POLR2J2Q9GZM3 115 aaKnown RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 BTBD1Q9H0C5 482 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ST6GALNAC4Q9H4F1 302 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF226Q9NYT6 803 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ABI3Q9P2A4 366 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 CYP8B1Q9UNU6 501 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 E7EQ34 232 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 APOL3O95236 402 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 HLA-DQB2P05538 268 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 IDH3AP50213 366 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 LRRC32Q14392 662 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 GJD3Q8N144 294 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 GALNT11Q8NCW6 608 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SLC22A8Q8TCC7 542 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 AP1S3Q96PC3 154 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SDCBP2Q9H190 292 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 PIGVQ9NUD9 493 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 LEFTY2O00292 366 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 OC90Q02509 493 aaPredicted RBP13.97□□□□□ -0.17
TRAF1-201ENST00000373887 TIGD6Q17RP2 521 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SLC25A25Q6KCM7 469 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 PYCR2Q96C36 320 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 FARSBQ9NSD9 589 aaKnown RBP13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SNED1Q8TER0 1413 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 A0A1W2PRQ8 180 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 NUAK1O60285 661 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SCELO95171 688 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 FAM76BQ5HYJ3 339 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF101Q8IZC7 436 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 TMCO6Q96DC7 493 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SEZ6LQ9BYH1 1024 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 FBXL3Q9UKT7 428 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 FARSAQ9Y285 508 aaKnown RBP13.97□□□□□ -0.17
TRAF1-201ENST00000373887 CCRL2O00421 344 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SLC10A3P09131 477 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 GBX2P52951 348 aaPredicted RBP13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SLC10A7Q0GE19 358 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SLC22A17Q8WUG5 538 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 CDK15Q96Q40 435 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 CYP27C1Q4G0S4 372 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SYCE2Q6PIF2 218 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SPATC1Q76KD6 591 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 WFIKKN2Q8TEU8 576 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
TRAF1-201ENST00000373887 A0A0J9YVX5 310 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 MTHFD1P11586 935 aaKnown RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 HOXB6P17509 224 aaKnown RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 FAM174BQ3ZCQ3 159 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 EOGTQ5NDL2 527 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 RBM48Q5RL73 367 aaKnown RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 CMTR2Q8IYT2 770 aaKnown RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 KLHL36Q8N4N3 616 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 MTERF1Q99551 399 aaKnown RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 AMBNQ9NP70 447 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms