RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 SELENOSQ9BQE4 189 aa11.54□□□□□ -0.56
HDAC8-204ENST00000373560 TTYH2Q9BSA4 534 aa11.54□□□□□ -0.56
HDAC8-204ENST00000373560 ATG10Q9H0Y0 220 aa11.54□□□□□ -0.56
HDAC8-204ENST00000373560 UBP1Q9NZI7 540 aa11.54□□□□□ -0.56
HDAC8-204ENST00000373560 TDRKHQ9Y2W6 561 aaKnown RBP11.54□□□□□ -0.56
HDAC8-204ENST00000373560 CR1P17927 2039 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 LOC105369274A0A096LPK9 316 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 LOC102723532A0A0G2JNH3 316 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 HYKKA2RU49 373 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 USP27XA6NNY8 438 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 TMCO5BA8MYB1 307 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 ARHGEF9O43307 516 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 HEXBP07686 556 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 IFI16Q16666 785 aaKnown RBP11.53□□□□□ -0.56
HDAC8-204ENST00000373560 WASHC2DQ5SRD0 308 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 YOD1Q5VVQ6 348 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-204ENST00000373560 ACAD11Q709F0 780 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 ZC3H7AQ8IWR0 971 aaKnown RBP11.53□□□□□ -0.56
HDAC8-204ENST00000373560 OR4N4Q8N0Y3 316 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 LGI4Q8N135 537 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 FATE1Q969F0 183 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 TUBB6Q9BUF5 446 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 XPO4Q9C0E2 1151 aaKnown RBP11.53□□□□□ -0.56
HDAC8-204ENST00000373560 KCNK13Q9HB14 408 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 ENAMQ9NRM1 1142 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 TRPC4Q9UBN4 977 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 ADGRE2Q9UHX3 823 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 TGP01266 2768 aa11.53□□□□□ -0.56
HDAC8-204ENST00000373560 KIAA1549Q9HCM3 1950 aa11.52□□□□□ -0.56
HDAC8-204ENST00000373560 OR2W5A6NFC9 320 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 NPIPA2E9PIF3 369 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 NPIPA3F8WFD2 350 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 IFRD1O00458 451 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-204ENST00000373560 NDST3O95803 873 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 DESP17661 470 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 PAFAH1B3Q15102 231 aaKnown RBP11.52□□□□□ -0.57
HDAC8-204ENST00000373560 PLAG1Q6DJT9 500 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 MAPK1IP1LQ8NDC0 245 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 DTX3LQ8TDB6 740 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 DENND1AQ8TEH3 1009 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 ZNF775Q96BV0 537 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-204ENST00000373560 CALR3Q96L12 384 aaKnown RBP11.52□□□□□ -0.57
HDAC8-204ENST00000373560 AGPAT1Q99943 283 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 YIPF2Q9BWQ6 316 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 THAP2Q9H0W7 228 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 RAB6BQ9NRW1 208 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 IL1RAPL1Q9NZN1 696 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 LIPGQ9Y5X9 500 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 ALG6Q9Y672 507 aa11.52□□□□□ -0.57
HDAC8-204ENST00000373560 CLCA1A8K7I4 914 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 PES1O00541 588 aaKnown RBP11.51□□□□□ -0.57
HDAC8-204ENST00000373560 HRGP04196 525 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 ACVR2AP27037 513 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 PKLRP30613 574 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 MAT1AQ00266 395 aaKnown RBP11.51□□□□□ -0.57
HDAC8-204ENST00000373560 SLC25A11Q02978 314 aaKnown RBP11.51□□□□□ -0.57
HDAC8-204ENST00000373560 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 MESDQ14696 234 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 KIR2DS3Q14952 304 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 TAZQ16635 292 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 MEP1AQ16819 746 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 SLC25A35Q3KQZ1 300 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 GXYLT1Q4G148 440 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 ZNF585AQ6P3V2 769 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 FIGLAQ6QHK4 219 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 CPNE8Q86YQ8 564 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 LINC01560Q8TB33 94 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 ZNF398Q8TD17 642 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 KIAA1191Q96A73 305 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 PERPQ96FX8 193 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 TIGD1Q96MW7 591 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 IL17FQ96PD4 163 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 DEFB127Q9H1M4 99 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 FAM96AQ9H5X1 160 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 PARVAQ9NVD7 372 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 TRMT1Q9NXH9 659 aaKnown RBP11.51□□□□□ -0.57
HDAC8-204ENST00000373560 OR6C2Q9NZP2 312 aa11.51□□□□□ -0.57
HDAC8-204ENST00000373560 ZC3H7BQ9UGR2 993 aaKnown RBP11.51□□□□□ -0.57
HDAC8-204ENST00000373560 MBD3L4A6NDZ8 208 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-204ENST00000373560 MBD3L5A6NJ08 208 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-204ENST00000373560 SLC16A5O15375 505 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 PRMT3O60678 531 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 SMPD2O60906 423 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 ATP1A3P13637 1013 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 PCK1P35558 622 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 CD151P48509 253 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 GPR85P60893 370 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 IFI35P80217 286 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-204ENST00000373560 TCTE1Q5JU00 501 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 PRMT9Q6P2P2 845 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 CAPN12Q6ZSI9 719 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 SULF2Q8IWU5 870 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 LRRC75A-AS1Q8N1F1 130 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 DEPDC4Q8N2C3 294 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 SLC25A41Q8N5S1 370 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 CCNYQ8ND76 341 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 BLOC1S5Q8TDH9 187 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 PLCD4Q9BRC7 762 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms