RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 BPIFB6Q8NFQ5 453 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 SH3KBP1Q96B97 665 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 ETAA1Q9NY74 926 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 SH2B3Q9UQQ2 575 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 PLXNA2O75051 1894 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 CLIC1O00299 241 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 AXIN1O15169 862 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 TIMP1P01033 207 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 COX7A2P14406 83 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 TPD52P55327 224 aaPredicted RBP23.06■■□□□ 1.28
CDK9-201ENST00000373264 TSTA3Q13630 321 aaPredicted RBP23.06■■□□□ 1.28
CDK9-201ENST00000373264 GTF2H3Q13889 308 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 SYTL3Q4VX76 610 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 ZDHHC21Q8IVQ6 265 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 ZCCHC7Q8N3Z6 543 aaKnown RBP23.06■■□□□ 1.28
CDK9-201ENST00000373264 PJA1Q8NG27 643 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 FBXL8Q96CD0 374 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 LHPPQ9H008 270 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 AASDHPPTQ9NRN7 309 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 CXXC1Q9P0U4 656 aaPredicted RBP23.06■■□□□ 1.28
CDK9-201ENST00000373264 GULP1Q9UBP9 304 aa23.06■■□□□ 1.28
CDK9-201ENST00000373264 WNT9AO14904 365 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 GBAP04062 536 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 NR4A1P22736 598 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 DCKP27707 260 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 AP1S2P56377 157 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 IL1RL1Q01638 556 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 SP140Q13342 867 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 ELMSAN1Q6PJG2 1045 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 CYP4Z1Q86W10 505 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 C12orf40Q86WS4 652 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 DDHD1Q8NEL9 900 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 CNIH3Q8TBE1 160 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 SNX19Q92543 992 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 PAK1IP1Q9NWT1 392 aaPredicted RBP23.05■■□□□ 1.28
CDK9-201ENST00000373264 VPS29Q9UBQ0 182 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 ANTXRLA6NF34 631 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 CFAP99D6REC4 459 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 K7ESM1 405 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 ARHGEF15O94989 841 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 KCNK5O95279 499 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 HPRP00739 348 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 GSTM1P09488 218 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 MAP4P27816 1152 aaKnown RBP23.05■■□□□ 1.28
CDK9-201ENST00000373264 RAE1P78406 368 aaKnown RBP23.05■■□□□ 1.28
CDK9-201ENST00000373264 GSTM4Q03013 218 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 ABHD18Q0P651 414 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 ZDHHC20Q5W0Z9 365 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 DCP2Q8IU60 420 aaKnown RBP23.05■■□□□ 1.28
CDK9-201ENST00000373264 RASGRP3Q8IV61 690 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 NELL1Q92832 810 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 PKP4Q99569 1192 aa23.05■■□□□ 1.28
CDK9-201ENST00000373264 RBM4BQ9BQ04 359 aaKnown RBP23.05■■□□□ 1.28
CDK9-201ENST00000373264 RBM4Q9BWF3 364 aaKnown RBP23.05■■□□□ 1.28
CDK9-201ENST00000373264 ZNF30P17039 623 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 FSHRP23945 695 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 IMPA1P29218 277 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 ACOX1Q15067 660 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 ZNF77Q15935 545 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 DUOXA1Q1HG43 343 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 HKDC1Q2TB90 917 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 PTOV1Q86YD1 416 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 ADHFE1Q8IWW8 467 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 EID3Q8N140 333 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 C1orf52Q8N6N3 182 aaKnown RBP23.04■■□□□ 1.28
CDK9-201ENST00000373264 BTN2A2Q8WVV5 523 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 LOC100130705A0A1B0GUX0 176 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 MYO1GB0I1T2 1018 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 PTGES3LE9PB15 166 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 SLC16A5O15375 505 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 MAN1A2O60476 641 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 PSIP1O75475 530 aaKnown RBP23.04■■□□□ 1.28
CDK9-201ENST00000373264 CYP2A6P11509 494 aaPredicted RBP23.04■■□□□ 1.28
CDK9-201ENST00000373264 EPCAMP16422 314 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 VLDLRP98155 873 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 CREMQ03060 361 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 MTAPQ13126 283 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 C6orf141Q5SZD1 244 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 ZZZ3Q8IYH5 903 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 OR52E4Q8NGH9 312 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 OR5K1Q8NHB7 308 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 B4GALNT2Q8NHY0 566 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 MAL2Q969L2 176 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 TMEM159Q96B96 161 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 OSBPL6Q9BZF3 934 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 CRISPLD2Q9H0B8 497 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 SGK2Q9HBY8 427 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 PREBQ9HCU5 417 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 IL36AQ9UHA7 158 aa23.04■■□□□ 1.28
CDK9-201ENST00000373264 NPC1O15118 1278 aa23.03■■□□□ 1.28
CDK9-201ENST00000373264 XPNPEP2O43895 674 aa23.03■■□□□ 1.28
CDK9-201ENST00000373264 CPNE6O95741 557 aa23.03■■□□□ 1.28
CDK9-201ENST00000373264 AQP1P29972 269 aa23.03■■□□□ 1.28
CDK9-201ENST00000373264 TMEM115Q12893 351 aaPredicted RBP23.03■■□□□ 1.28
CDK9-201ENST00000373264 DCTN2Q13561 401 aaKnown RBP23.03■■□□□ 1.28
CDK9-201ENST00000373264 DPY19L1Q2PZI1 675 aa23.03■■□□□ 1.28
CDK9-201ENST00000373264 CPZQ66K79 652 aa23.03■■□□□ 1.28
CDK9-201ENST00000373264 TMEM220Q6QAJ8 160 aa23.03■■□□□ 1.28
CDK9-201ENST00000373264 XKR5Q6UX68 686 aa23.03■■□□□ 1.28
CDK9-201ENST00000373264 PARS2Q7L3T8 475 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms