RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 B3GNT3Q9Y2A9 372 aa18.04■□□□□ 0.48
TMEM53-201ENST00000372235 E7ENX8 843 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 SLC16A5O15375 505 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 CNOT3O75175 753 aaKnown RBP18.03■□□□□ 0.48
TMEM53-201ENST00000372235 HAUS5O94927 633 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 ANXA5P08758 320 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 HIST1H2AGP0C0S8 130 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-201ENST00000372235 HIST1H2ADP20671 130 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 MCM3P25205 808 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 ITGA3P26006 1051 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 AP2B1P63010 937 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 TAP2Q03519 686 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 ILF2Q12905 390 aaKnown RBP18.03■□□□□ 0.48
TMEM53-201ENST00000372235 CRYMQ14894 314 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 MORF4L2Q15014 288 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 PRTGQ2VWP7 1150 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 TUBB8Q3ZCM7 444 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 SLC6A19Q695T7 634 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 ZNF549Q6P9A3 640 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 SUSD1Q6UWL2 747 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 PAQR7Q86WK9 346 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 MYO1HQ8N1T3 1032 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 CSNK1A1LQ8N752 337 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 CD200R1Q8TD46 325 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 ZNF480Q8WV37 535 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 HIST1H2AHQ96KK5 128 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 HIST1H2AJQ99878 128 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 TRIM56Q9BRZ2 755 aaKnown RBP18.03■□□□□ 0.48
TMEM53-201ENST00000372235 H2AFJQ9BTM1 129 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 C14orf105Q9NVL8 296 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 RNF14Q9UBS8 474 aa18.03■□□□□ 0.48
TMEM53-201ENST00000372235 MYO18BQ8IUG5 2567 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 CLEC18AA5D8T8 446 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 H0YGG7 62 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 ATXN8OSP0DMR3 200 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 FBLP22087 321 aaKnown RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 PAFAH1B1P43034 410 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 OR1D4P47884 311 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 ARF3P61204 181 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 CUL1Q13616 776 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 DSG2Q14126 1118 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 INPP5JQ15735 1006 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 AGAP7PQ5VUJ5 663 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 ZNF425Q6IV72 752 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 CLEC18BQ6UXF7 455 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 CYHR1Q6ZMK1 362 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 COX15Q7KZN9 410 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 ADCK2Q7Z695 626 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 CNTN4Q8IWV2 1026 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 RBMXL3Q8N7X1 1067 aaKnown RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 CLEC18CQ8NCF0 446 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 GIMAP7Q8NHV1 300 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 THAP11Q96EK4 314 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 AGAP4Q96P64 663 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 CRB3Q9BUF7 120 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 ILKAPQ9H0C8 392 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 DDX47Q9H0S4 455 aaKnown RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 ZNF552Q9H707 407 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 SLC6A20Q9NP91 592 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 CCDC177Q9NQR7 707 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 TMEM184CQ9NVA4 438 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 TRMT1Q9NXH9 659 aaKnown RBP18.02■□□□□ 0.48
TMEM53-201ENST00000372235 FBXL4Q9UKA2 621 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 MED16Q9Y2X0 877 aa18.02■□□□□ 0.48
TMEM53-201ENST00000372235 SNRNP200O75643 2136 aaKnown RBP18.01■□□□□ 0.47
TMEM53-201ENST00000372235 TENM4Q6N022 2769 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 IGLV3-12A0A075B6K2 115 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 LOC105369274A0A096LPK9 316 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 LOC102723532A0A0G2JNH3 316 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 CCDC188H7C350 402 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 MAP2K7O14733 419 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 ZGLP1P0C6A0 271 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 FDXRP22570 491 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 CXCR2P25025 360 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 DHX9Q08211 1270 aaKnown RBP18.01■□□□□ 0.47
TMEM53-201ENST00000372235 FAM53BQ14153 422 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 FHL5Q5TD97 284 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 CPNE9Q8IYJ1 553 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 OR4N4Q8N0Y3 316 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 STT3BQ8TCJ2 826 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 OR2A5Q96R48 311 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 SLC30A3Q99726 388 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 TRIM54Q9BYV2 358 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 LHPPQ9H008 270 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 SOX17Q9H6I2 414 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-201ENST00000372235 EPS8L2Q9H6S3 715 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 PARVBQ9HBI1 364 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 MKKSQ9NPJ1 570 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-201ENST00000372235 CTSFQ9UBX1 484 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 HS3ST3B1Q9Y662 390 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 MAU2Q9Y6X3 613 aa18.01■□□□□ 0.47
TMEM53-201ENST00000372235 SOCS6O14544 535 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 HPP00738 406 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 ACPPP15309 386 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 GRK3P35626 688 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 AVPR1BP47901 424 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 RPS15AP62244 130 aaKnown RBP18■□□□□ 0.47
TMEM53-201ENST00000372235 MPP1Q00013 466 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 DR1Q01658 176 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 RAPSNQ13702 412 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms