RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 EIF4HQ15056 248 aaKnown RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 KIAA1211LQ6NV74 962 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 CYP2R1Q6VVX0 501 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 RFLNAQ6ZTI6 216 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ZNF765Q7L2R6 523 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 TECPR1Q7Z6L1 1165 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 HDDC3Q8N4P3 179 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 CYB5D2Q8WUJ1 264 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 BTN2A2Q8WVV5 523 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ACTL8Q9H568 366 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 DNAJC11Q9NVH1 559 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 AP4B1Q9Y6B7 739 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 LAMA1P25391 3075 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ZNF839A8K0R7 811 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ZNF217O75362 1048 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 KCNH1O95259 989 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ELFN1P0C7U0 828 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 GDF5P43026 501 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 PRLHRP49683 370 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 HNRNPFP52597 415 aaKnown RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 ELP6Q0PNE2 266 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 KIAA0040Q15053 153 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 RFTN2Q52LD8 501 aaPredicted RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 TBCELQ5QJ74 424 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 INTS11Q5TA45 600 aaKnown RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 NANOGP8Q6NSW7 305 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 Q6ZVL8 140 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 KDF1Q8NAX2 398 aaPredicted RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 TNIP2Q8NFZ5 429 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 LRTOMTQ8WZ04 291 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ELMO1Q92556 727 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ZNF597Q96LX8 424 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 CGREF1Q99674 301 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 SH3GL1Q99961 368 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 OSBPL11Q9BXB4 747 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 DPY30Q9C005 99 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 ZCCHC2Q9C0B9 1178 aaKnown RBP13.66□□□□□ -0.22
LDB3-204ENST00000372066 NANOGQ9H9S0 305 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 CD84Q9UIB8 345 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 CYP8B1Q9UNU6 501 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 RNF11Q9Y3C5 154 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 PCDHB3Q9Y5E6 796 aa13.66□□□□□ -0.22
LDB3-204ENST00000372066 CEP295Q9C0D2 2601 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 THADAQ6YHU6 1953 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 KCNE1BA0A087WTH5 132 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 IGHV1OR15-9A0A0B4J2B8 117 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 SPAARA0A1B0GVQ0 90 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 C16orf96A6NNT2 1141 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 PRRT4C9JH25 899 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 C9JVG2 144 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 CTSLP07711 333 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 LINGO3P0C6S8 592 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 C7P10643 843 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 ZNF26P17031 533 aaPredicted RBP13.65□□□□□ -0.22
LDB3-204ENST00000372066 NDUFV2P19404 249 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 SIM1P81133 766 aaPredicted RBP13.65□□□□□ -0.22
LDB3-204ENST00000372066 PEAR1Q5VY43 1037 aaPredicted RBP13.65□□□□□ -0.22
LDB3-204ENST00000372066 LIPJQ5W064 366 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 UGT2A3Q6UWM9 527 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 LIPIQ6XZB0 460 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 MSANTD1Q6ZTZ1 278 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 RABEPKQ7Z6M1 372 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 PIP4P1Q86T03 277 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 RGL4Q8IZJ4 473 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 PAPD5Q8NDF8 572 aaKnown RBP13.65□□□□□ -0.22
LDB3-204ENST00000372066 TMIEQ8NEW7 156 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 DNAJB14Q8TBM8 379 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 SKA2Q8WVK7 121 aaPredicted RBP13.65□□□□□ -0.22
LDB3-204ENST00000372066 CANT1Q8WVQ1 401 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 SLC13A3Q8WWT9 602 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 OR8D1Q8WZ84 308 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 GLYATL1Q969I3 302 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 METTL2AQ96IZ6 378 aaKnown RBP13.65□□□□□ -0.22
LDB3-204ENST00000372066 RIOK2Q9BVS4 552 aaKnown RBP13.65□□□□□ -0.22
LDB3-204ENST00000372066 CFAP47Q6ZTR5 3102 aa13.65□□□□□ -0.22
LDB3-204ENST00000372066 GON4LQ3T8J9 2241 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 EDDM13A0A1B0GTR0 161 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 FFAR3O14843 346 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 WNT9AO14904 365 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 GPR42O15529 346 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 AKAP10O43572 662 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 SGTAO43765 313 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 HYAL3O43820 417 aaPredicted RBP13.64□□□□□ -0.23
LDB3-204ENST00000372066 NDUFS2O75306 463 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 SEC22BO75396 215 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 PSIP1O75475 530 aaKnown RBP13.64□□□□□ -0.23
LDB3-204ENST00000372066 CATP04040 527 aaKnown RBP13.64□□□□□ -0.23
LDB3-204ENST00000372066 HOXB6P17509 224 aaKnown RBP13.64□□□□□ -0.23
LDB3-204ENST00000372066 EPORP19235 508 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 FASP25445 335 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 ITGB7P26010 798 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 MAP4P27816 1152 aaKnown RBP13.64□□□□□ -0.23
LDB3-204ENST00000372066 ETV3P41162 512 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 PCDH1Q08174 1060 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 CSTF3Q12996 717 aaKnown RBP13.64□□□□□ -0.23
LDB3-204ENST00000372066 SYTL3Q4VX76 610 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 LRRC73Q5JTD7 316 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 FBXL19Q6PCT2 694 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 SLC2A7Q6PXP3 512 aa13.64□□□□□ -0.23
LDB3-204ENST00000372066 DLEU7Q6UYE1 221 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms