RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 RFPL1O75677 317 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 STK16O75716 305 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 OR2B3O76000 313 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 WDR47O94967 919 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 CCNYL3P0C7X3 344 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 GNAZP19086 355 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 TAC1P20366 129 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 GGT5P36269 586 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 CCT5P48643 541 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 CCR8P51685 355 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 DLG1Q12959 904 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 NAA30Q147X3 362 aaPredicted RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 TLDC1Q6P9B6 456 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 LRRC69Q6ZNQ3 347 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 THOC6Q86W42 341 aaKnown RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 MCATQ8IVS2 390 aaKnown RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 ZNF655Q8N720 491 aaPredicted RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 SNIP1Q8TAD8 396 aaKnown RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 PYCR2Q96C36 320 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 ZNF501Q96CX3 271 aaPredicted RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 ATOH8Q96SQ7 321 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 ZFYVE21Q9BQ24 234 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 SELENOSQ9BQE4 189 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 TMEM121BQ9BXQ6 578 aaPredicted RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 NLNQ9BYT8 704 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 DPH1Q9BZG8 443 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 MRPL46Q9H2W6 279 aaKnown RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 APMAPQ9HDC9 416 aa13.22□□□□□ -0.29
SSR4-202ENST00000370085 RRAGDQ9NQL2 400 aaPredicted RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
SSR4-202ENST00000370085 OR2A25A4D2G3 310 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 UBXN8O00124 270 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 CLGNO14967 610 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 CPNE3O75131 537 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 H2AFYO75367 372 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 SCRG1O75711 98 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 STK17BO94768 372 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 LIPCP11150 499 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 PYGBP11216 843 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 NPPBP16860 134 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 CXCR2P25025 360 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 PIK3CGP48736 1102 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 ALDH18A1P54886 795 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 RPS15AP62244 130 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 ZIC1Q15915 447 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 KRT71Q3SY84 523 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 TECRLQ5HYJ1 363 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 YOD1Q5VVQ6 348 aaPredicted RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 FCRL6Q6DN72 434 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 METTL2BQ6P1Q9 378 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 LRRC70Q7Z2Q7 622 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 FAM20CQ8IXL6 584 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 KLHDC8AQ8IYD2 350 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 DNAJC22Q8N4W6 341 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 ESX1Q8N693 406 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 TTC29Q8NA56 475 aaPredicted RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 KDF1Q8NAX2 398 aaPredicted RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 OR2W6PQ8NHA6 318 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 HNRNPLLQ8WVV9 542 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 KCNE4Q8WWG9 221 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 SLC5A11Q8WWX8 675 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 THAP11Q96EK4 314 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 NDC1Q9BTX1 674 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 CD244Q9BZW8 370 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 IQCGQ9H095 443 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 FAM60AQ9NP50 221 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 SLC6A20Q9NP91 592 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 DNAJC11Q9NVH1 559 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 WDR70Q9NW82 654 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 EURLQ9NYK6 297 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 GPRC5BQ9NZH0 403 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 FOXJ2Q9P0K8 574 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 CPSF2Q9P2I0 782 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 OPTCQ9UBM4 332 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 PTBP2Q9UKA9 531 aaKnown RBP13.21□□□□□ -0.29
SSR4-202ENST00000370085 SRPK3Q9UPE1 567 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 SLC22A14Q9Y267 594 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 KLHL20Q9Y2M5 609 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 ANGPTL3Q9Y5C1 460 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
SSR4-202ENST00000370085 GOLGA6L10A6NI86 522 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 H7BY64 318 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 COPEO14579 308 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 ZSCAN9O15535 394 aaPredicted RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 CCNT2O60583 730 aaKnown RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 GLRA3O75311 464 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 KATNA1O75449 491 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 KIAA0754O94854 1291 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 KLK3P07288 261 aaPredicted RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 MYZAPP0CAP1 466 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 CDH1P12830 882 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 SLC6A12P48065 614 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 HSPA7P48741 367 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 ARSFP54793 590 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 CDC16Q13042 620 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 MAP7Q14244 749 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 GRM7Q14831 915 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms